RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 NSMAFQ92636 917 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 NABP1Q96AH0 204 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 NRBF2Q96F24 287 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 DHRS9Q9BPW9 319 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 IFT27Q9BW83 186 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 CXXC4Q9H2H0 198 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 POU2F3Q9UKI9 436 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 BAIAP2Q9UQB8 552 aa13.07□□□□□ -0.32
CSNK1E-210ENST00000442216 PRRC2AP48634 2157 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 E7EQL1 145 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 SOCS2O14508 198 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 E2F6O75461 281 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 PTHP01270 115 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 ANXA8P13928 327 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 PAX1P15863 534 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 NOS3P29474 1203 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 GIPRP48546 466 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 PTDSS1P48651 473 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 PIGFQ07326 219 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 NPRL3Q12980 569 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 TESK1Q15569 626 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 DNM1P34Q6PK57 102 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 PTCHD4Q6ZW05 846 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 DTX2Q86UW9 622 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 LRRC75A-AS1Q8N1F1 130 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 TMEM171Q8WVE6 324 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 NEUROG1Q92886 237 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 UTP4Q969X6 686 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 GTPBP3Q969Y2 492 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 FEVQ99581 238 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 SH3GL3Q99963 347 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 C1orf198Q9H425 327 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 EGLN3Q9H6Z9 239 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 PDP1Q9P0J1 537 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 MOKQ9UQ07 419 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 AP4S1Q9Y587 144 aa13.06□□□□□ -0.32
CSNK1E-210ENST00000442216 MYO9AB2RTY4 2548 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 ATP6V1G2-DDX39BF2Z307 99 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 H7C1C5 153 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 BHLHE40O14503 412 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 KHDRBS3O75525 346 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 RENP00797 406 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 SERPINA5P05154 406 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CELA3BP08861 270 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CST2P09228 141 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 MMP7P09237 267 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 FCGR1AP12314 374 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 MSR1P21757 451 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CRABP1P29762 137 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CDAP32320 146 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 TTKP33981 857 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CDKN2AP42771 156 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 ART1P52961 327 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 PCBD1P61457 104 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 LCN6P62502 163 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CCNIQ14094 377 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 SGCAQ16586 387 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 AGAP6Q5VW22 663 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 SHQ1Q6PI26 577 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 YTHDF3Q7Z739 585 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 TMEM179BQ7Z7N9 219 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 SYT9Q86SS6 491 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 JAZF1Q86VZ6 243 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 LNX2Q8N448 690 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 LRRC18Q8N456 261 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 NUP37Q8NFH4 326 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 FGFBP3Q8TAT2 258 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 DNAJC9Q8WXX5 260 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 NIPSNAP1Q9BPW8 284 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 BDH2Q9BUT1 245 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 SYT4Q9H2B2 425 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 CXorf56Q9H5V9 222 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 RNF121Q9H920 327 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 NTN4Q9HB63 628 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 NOX3Q9HBY0 568 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 TBC1D23Q9NUY8 699 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 ITGB1BP2Q9UKP3 347 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 ARID1AO14497 2285 aa13.05□□□□□ -0.32
CSNK1E-210ENST00000442216 IGHV2OR16-5A0A0B4J2B6 119 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 A0A1W2PPL8 197 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 SLC16A7O60669 478 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 SMPD2O60906 423 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 TIPRLO75663 272 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 TP53P04637 393 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 ZNF35P13682 527 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 HIST1H1CP16403 213 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 CTLA4P16410 223 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 FASP25445 335 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 LAP3P28838 519 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 CALCRP30988 508 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 APOBEC3AP31941 199 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 ERFP50548 548 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 PLP2Q04941 152 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 ATP6AP1Q15904 470 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 B3GLCTQ6Y288 498 aa13.04□□□□□ -0.32
CSNK1E-210ENST00000442216 SPNS3Q6ZMD2 512 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms