RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 ZNF14P17017 642 aaPredicted RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 FASP25445 335 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 CRABP1P29762 137 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 CDAP32320 146 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 CDKN2AP42771 156 aaKnown RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 GIPRP48546 466 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 PTDSS1P48651 473 aaKnown RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 IDH3GP51553 393 aaPredicted RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 LCN6P62502 163 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 PIGFQ07326 219 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 NPRL3Q12980 569 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 ATP6AP1Q15904 470 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 SGCAQ16586 387 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 DEFB113Q30KQ7 82 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 FAM27BQ5VT28 67 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF544Q6NX49 715 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 SHQ1Q6PI26 577 aaKnown RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 DNM1P34Q6PK57 102 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 PTCHD4Q6ZW05 846 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 YTHDF3Q7Z739 585 aaKnown RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 TMEM179BQ7Z7N9 219 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 JAZF1Q86VZ6 243 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 C10orf67Q8IYJ2 551 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 OR4F15Q8NGB8 312 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 SMAP2Q8WU79 429 aaPredicted RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 IGFBPL1Q8WX77 278 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 NEUROG1Q92886 237 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 NABP1Q96AH0 204 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF75AQ96N20 296 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 NIPSNAP1Q9BPW8 284 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 DHRS9Q9BPW9 319 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 WACQ9BTA9 647 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 SEC61A2Q9H9S3 476 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 ZNF556Q9HAH1 456 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 TBC1D23Q9NUY8 699 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 MOKQ9UQ07 419 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 AP4S1Q9Y587 144 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 ATP23Q9Y6H3 246 aa10.27□□□□□ -0.77
HSPG2-206ENST00000439717 RAI1Q7Z5J4 1906 aaPredicted RBP10.27□□□□□ -0.77
HSPG2-206ENST00000439717 PRR14LQ5THK1 2151 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
HSPG2-206ENST00000439717 A0A1W2PPL8 197 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 ATP6V1G2-DDX39BF2Z307 99 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 BHLHE40O14503 412 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 SLC16A7O60669 478 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 RENP00797 406 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 PTHP01270 115 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 SERPINA5P05154 406 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CELA3BP08861 270 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CST2P09228 141 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 MMP7P09237 267 aaPredicted RBP10.26□□□□□ -0.77
HSPG2-206ENST00000439717 DANCRP0C864 163 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 ANXA8P13928 327 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 HIST1H1CP16403 213 aaKnown RBP10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CTLA4P16410 223 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 MSR1P21757 451 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 ACTR3P61158 418 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 PCBD1P61457 104 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CLEC12AQ5QGZ9 265 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 LEG1Q6P5S2 330 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 SYT9Q86SS6 491 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 GLB1L2Q8IW92 636 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 LNX2Q8N448 690 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 LRRC18Q8N456 261 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 OR2T33Q8NG76 320 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 FGFBP3Q8TAT2 258 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 TMEM171Q8WVE6 324 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 DNAJC9Q8WXX5 260 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 RAB3IPQ96QF0 476 aaPredicted RBP10.26□□□□□ -0.77
HSPG2-206ENST00000439717 BDH2Q9BUT1 245 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 TSSK6Q9BXA6 273 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 PLA2G12AQ9BZM1 189 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 GRIP2Q9C0E4 1043 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 SYT4Q9H2B2 425 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CXXC4Q9H2H0 198 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 C1orf198Q9H425 327 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CXorf56Q9H5V9 222 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 RNF121Q9H920 327 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 NTN4Q9HB63 628 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 NOX3Q9HBY0 568 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 CCNB1IP1Q9NPC3 277 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 POLE4Q9NR33 117 aa10.26□□□□□ -0.77
HSPG2-206ENST00000439717 POLQO75417 2590 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 NAV2Q8IVL1 2488 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 IGHV2OR16-5A0A0B4J2B6 119 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 C12orf71A8MTZ7 269 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 TP53P04637 393 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-206ENST00000439717 PATE4P0C8F1 98 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 PAX1P15863 534 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 LAP3P28838 519 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 CALCRP30988 508 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 PLP2Q04941 152 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.25□□□□□ -0.77
HSPG2-206ENST00000439717 RAB39AQ14964 217 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 ETFDHQ16134 617 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 PGGHGQ32M88 737 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 AGAP6Q5VW22 663 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 B3GLCTQ6Y288 498 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 DTX2Q86UW9 622 aa10.25□□□□□ -0.77
HSPG2-206ENST00000439717 MYPOPQ86VE0 399 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms