RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 ADAM18Q9Y3Q7 739 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 UGT2A1Q9Y4X1 527 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 FKBP7Q9Y680 259 aa21.39■■□□□ 1.01
RAPGEF1-206ENST00000438647 UNC119BA6NIH7 251 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 PTP4A3O75365 173 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 ATP6V1B2P21281 511 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 RRM2P31350 389 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 EFNA4P52798 201 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 RPS23P62266 143 aaKnown RBP21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 TRIM25Q14258 630 aaKnown RBP21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 GPR139Q6DWJ6 353 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 LCN8Q6JVE9 175 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 CLEC2AQ6UVW9 174 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 CLEC9AQ6UXN8 241 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 DNM1P46Q6ZS02 220 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 TRPM8Q7Z2W7 1104 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 DHFR2Q86XF0 187 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 ZNF584Q8IVC4 421 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 LRRC18Q8N456 261 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 HTRA1Q92743 480 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 GPX7Q96SL4 187 aaPredicted RBP21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 PLK3Q9H4B4 646 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 CCNB1IP1Q9NPC3 277 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 SLC7A8Q9UHI5 535 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 CMAHPQ9Y471 501 aa21.38■■□□□ 1.01
RAPGEF1-206ENST00000438647 IGKV1D-43A0A0B4J1Z2 117 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 IQCMA0A1B0GVH7 501 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 OR10H3O60404 316 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 KRT36O76013 467 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 STAMBPO95630 424 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 ZNF26P17031 533 aaPredicted RBP21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 CDAP32320 146 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 GLRXP35754 106 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 SGCAQ16586 387 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 FAM122BQ7Z309 247 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 CLDN22Q8N7P3 220 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 SLC30A7Q8NEW0 376 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 OR1J2Q8NGS2 313 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 NABP1Q96AH0 204 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 Q96M85 177 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 SMR3AQ99954 134 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 RHNO1Q9BSD3 238 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 LRMDAQ9H2I8 198 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 NRIP3Q9NQ35 241 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 TAS2R1Q9NYW7 299 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 C2CD3Q4AC94 2353 aa21.37■■□□□ 1.01
RAPGEF1-206ENST00000438647 ARFGEF3Q5TH69 2177 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 SLC22A23A1A5C7 686 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 CSF3P09919 207 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 SDHAP31040 664 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 PPOXP50336 477 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 HSF2Q03933 536 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 TBC1D28Q2M2D7 210 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 FAM27BQ5VT28 67 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 DPY19L2P2Q6ZN68 376 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 ZER1Q7Z7L7 766 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 MAGIXQ9H6Y5 334 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 CDH20Q9HBT6 801 aa21.36■■□□□ 1.01
RAPGEF1-206ENST00000438647 PRSS37A4D1T9 235 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 F12P00748 615 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 HEXAP06865 529 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 MMP7P09237 267 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 FPR3P25089 353 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 RPS6KA3P51812 740 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 KRR1Q13601 381 aaKnown RBP21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 MESTQ5EB52 335 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 SMARCD3Q6STE5 483 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 ADCK1Q86TW2 530 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 ASB9Q96DX5 294 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 VRK1Q99986 396 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 REG4Q9BYZ8 158 aa21.35■■□□□ 1.01
RAPGEF1-206ENST00000438647 SETD2Q9BYW2 2564 aaPredicted RBP21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 TEX13CA0A0J9YWL9 993 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 A0A1W2PPL8 197 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 RNF223E7ERA6 249 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 H7C1C5 153 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 SNAP29O95721 258 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 ERCC1P07992 297 aaPredicted RBP21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 APLNRP35414 380 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 MAGEA2P43356 314 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 EVX1P49640 407 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 PCBD1P61457 104 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 LCN6P62502 163 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 THSD4Q6ZMP0 1018 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 FOXL2NBQ6ZUU3 175 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 SVOPLQ8N434 492 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 LINC00471Q8N535 108 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 FANK1Q8TC84 345 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 MRPL24Q96A35 216 aaKnown RBP21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 LRGUKQ96M69 825 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 RAB1BQ9H0U4 201 aa21.34■■□□□ 1.01
RAPGEF1-206ENST00000438647 TCRBV5S2A0A599 114 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 CST2P09228 141 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 APEHP13798 732 aaKnown RBP21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 ZNF32P17041 273 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 MSR1P21757 451 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 FAM98BQ52LJ0 330 aaKnown RBP21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 PABPC1L2AQ5JQF8 200 aa21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 CCDC124Q96CT7 223 aaKnown RBP21.33■■□□□ 1.01
RAPGEF1-206ENST00000438647 RASD2Q96D21 266 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms