RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GUCA1AP43080 201 aaPredicted RBP6.65□□□□□ -1.34
VPS50-204ENST00000438395 SEC24CP53992 1094 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 MTPNP58546 118 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 CCL8P80075 99 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 NPTX1Q15818 432 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 FXNQ16595 210 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 MSMPQ1L6U9 139 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ZMAT1Q5H9K5 638 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ENTPD8Q5MY95 495 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ELFN2Q5R3F8 820 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 AGBL2Q5U5Z8 902 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 MEX3DQ86XN8 651 aaKnown RBP6.65□□□□□ -1.34
VPS50-204ENST00000438395 FUNDC1Q8IVP5 155 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 SKA3Q8IX90 412 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 NOXO1Q8NFA2 376 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 OR4M2Q8NGB6 313 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 OR6T1Q8NGN1 323 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ZNF519Q8TB69 540 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ADAMTS16Q8TE57 1224 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 ZFAND2BQ8WV99 257 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 RAB1CQ92928 201 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 TMEM54Q969K7 222 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 C1orf159Q96HA4 380 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 CITED4Q96RK1 184 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 JMJD8Q96S16 334 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 CGREF1Q99674 301 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 SH3GL3Q99963 347 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 EBF4Q9BQW3 602 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 BCL2L14Q9BZR8 327 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 IKZF5Q9H5V7 419 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 SAP30LQ9HAJ7 183 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 SLC52A3Q9NQ40 469 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 EIF3KQ9UBQ5 218 aaKnown RBP6.65□□□□□ -1.34
VPS50-204ENST00000438395 NDUFAF1Q9Y375 327 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 GMEB1Q9Y692 573 aa6.65□□□□□ -1.34
VPS50-204ENST00000438395 TRBV5-3A0A0A0MS03 114 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 IGHV1-69-2A0A0G2JMI3 117 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 ISPDA4D126 451 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 C17orf100A8MU93 164 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 TRIM77I1YAP6 450 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 M0QX08 132 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 MPZL1O95297 269 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 SNAP29O95721 258 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 PNPP00491 289 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 IFNA14P01570 189 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 CCL2P13500 99 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 PCBP3P57721 371 aaKnown RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 TAS2R41P59536 307 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 MYBPC1Q00872 1141 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 MVKQ03426 396 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 GLO1Q04760 184 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 CD47Q08722 323 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 ZP4Q12836 540 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 DUSP7Q16829 419 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 HFEQ30201 348 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 NRN1LQ496H8 165 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 FAM209AQ5JX71 171 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 AVPI1Q5T686 147 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 ACSM5Q6NUN0 579 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 DEF8Q6ZN54 512 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 PEG10Q86TG7 708 aaKnown RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 LRP11Q86VZ4 500 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 C10orf111Q8N326 155 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 BPIFB2Q8N4F0 458 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 C3orf56Q8N813 242 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 SYT14Q8NB59 555 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 GCDHQ92947 438 aaPredicted RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 ZMYND19Q96E35 227 aaPredicted RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 ARHGDIGQ99819 225 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 SH3GL1Q99961 368 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 GAL3ST1Q99999 423 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 EGLN1Q9GZT9 426 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 ZNF665Q9H7R5 613 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 INIPQ9NRY2 104 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 INTS9Q9NV88 658 aaKnown RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 ZNF224Q9NZL3 707 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 MYEF2Q9P2K5 600 aaKnown RBP6.64□□□□□ -1.35
VPS50-204ENST00000438395 BAG5Q9UL15 447 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 ANK2Q01484 3957 aa6.64□□□□□ -1.35
VPS50-204ENST00000438395 CENPBD1B2RD01 187 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 FAM157AC9JC47 383 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 MGRN1O60291 552 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 TPST2O60704 377 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 NCR1O76036 304 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 OR7A10O76100 309 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 IGFBP1P08833 259 aaPredicted RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 PGA4P0DJD7 388 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 PGA3P0DJD8 388 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 COL8A2P25067 703 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 RBM34P42696 430 aaKnown RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 MAGEB1P43366 347 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 GDI2P50395 445 aaKnown RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 ZNF81P51508 661 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 UCP2P55851 309 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 RUNX1T1Q06455 604 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 SLC3A1Q07837 685 aa6.63□□□□□ -1.35
VPS50-204ENST00000438395 TOP3AQ13472 1001 aaPredicted RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 CYLC2Q14093 348 aaPredicted RBP6.63□□□□□ -1.35
VPS50-204ENST00000438395 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms