RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 CMTM8Q8IZV2 173 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 OR2L13Q8N349 312 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 ARHGAP18Q8N392 663 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 OR1L6Q8NGR2 347 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 MARC2Q969Z3 335 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 C8orf44Q96CB5 159 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 ECHDC3Q96DC8 303 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 P2RY13Q9BPV8 354 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 C7orf50Q9BRJ6 194 aaKnown RBP3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 POTEKPQ9BYX7 375 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 NTN4Q9HB63 628 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 NMRAL1Q9HBL8 299 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 SLC38A10Q9HBR0 1119 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 SH2D2AQ9NP31 389 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 SLC7A10Q9NS82 523 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 MARCH5Q9NX47 278 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 KCNIP1Q9NZI2 227 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 SLC17A7Q9P2U7 560 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 ASF1AQ9Y294 204 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 PEX16Q9Y5Y5 336 aa3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 COL2A1P02458 1487 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P45-201ENST00000435986 LRRK1Q38SD2 2015 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 KBTBD11-OT1A0A1B0GTJ5 212 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 A0A1B0GW15 77 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 A0A1W2PPE3 182 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 VSTM2BA6NLU5 285 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 CDX4O14627 284 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 PHOX2AO14813 284 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 RAB29O14966 203 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 RPP14O95059 124 aaKnown RBP3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 RETP07949 1114 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 KRT7P08729 469 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 PCK1P35558 622 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 P2RY2P41231 377 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 SLC1A2P43004 574 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 KIR2DS4P43632 304 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 QARSP47897 775 aaKnown RBP3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 NPBWR2P48146 333 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 EMP2P54851 167 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 DSCR10P59022 87 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 RAB10P61026 200 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 SELENOTP62341 195 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 ERVK-25P63136 954 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 LCN2P80188 198 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 SCRN3Q0VDG4 424 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 STX5Q13190 355 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 OR5I1Q13606 314 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 DUSP7Q16829 419 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 KRTAP27-1Q3LI81 207 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 VPS26BQ4G0F5 336 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 CLVS2Q5SYC1 327 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 C1orf146Q5VVC0 180 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 MFSD14CQ5VZR4 134 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 TIGD3Q6B0B8 471 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 FAM151BQ6UXP7 276 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 LRRC31Q6UY01 552 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 Q6ZN92 141 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 C19orf35Q6ZS72 473 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 ZNF677Q86XU0 584 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 ERI1Q8IV48 349 aaKnown RBP3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 PRR22Q8IZ63 422 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 SNX31Q8N9S9 440 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 CYB561A3Q8NBI2 242 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 ZPLD1Q8TCW7 415 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 NAT6Q93015 286 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 C12orf42Q96LP6 360 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 TSSK3Q96PN8 268 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 CTRCQ99895 268 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 NAT9Q9BTE0 207 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 GBA3Q9H227 469 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 RPS10P5Q9NQ39 176 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 MYEF2Q9P2K5 600 aaKnown RBP3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 CLN8Q9UBY8 286 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 NAGKQ9UJ70 344 aa3.37□□□□□ -1.87
HMGB1P45-201ENST00000435986 IGLV3-10A0A075B6K4 115 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 KLF18A0A0U1RQI7 1052 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 OR6C70A6NIJ9 312 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 OR5B21A6NL26 309 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 CENPBD1B2RD01 187 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 DCTN6O00399 190 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 SCELO95171 688 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 ETHE1O95571 254 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 IGHV3-23P01764 117 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 P04436 131 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 RPN2P04844 631 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 MYL2P10916 166 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 MLNP12872 115 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 ABOP16442 354 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 TBPP20226 339 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 PTGDSP41222 190 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 BIDP55957 195 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 VGLL4Q14135 290 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 NSUN5P1Q3KNT7 163 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 DNAL1Q4LDG9 190 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 TTMPQ5BVD1 217 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 KLF17Q5JT82 389 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 HHATQ5VTY9 493 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 ENPP6Q6UWR7 440 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 UNQ9370/PRO34162Q6UXP9 181 aa3.36□□□□□ -1.87
HMGB1P45-201ENST00000435986 ASCL4Q6XD76 172 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms