RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 C10orf128Q5T292 105 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 CLEC18BQ6UXF7 455 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 TUBA1AQ71U36 451 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 BCDIN3DQ7Z5W3 292 aaKnown RBP13.47□□□□□ -0.25
CNOT9-205ENST00000433439 LRRC18Q8N456 261 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 CLEC18CQ8NCF0 446 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 STEAP2Q8NFT2 490 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 OR6K6Q8NGW6 343 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 OR2T4Q8NH00 348 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 OR52N5Q8NH56 324 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 S100PBPQ96BU1 408 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 DDOQ99489 341 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 ADI1Q9BV57 179 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 HDHD5Q9BXW7 423 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 NPDC1Q9NQX5 325 aaPredicted RBP13.47□□□□□ -0.25
CNOT9-205ENST00000433439 RASSF1Q9NS23 344 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 TMEM38BQ9NVV0 291 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
CNOT9-205ENST00000433439 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 FKBP7Q9Y680 259 aa13.47□□□□□ -0.25
CNOT9-205ENST00000433439 CACNA1CQ13936 2221 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 SH3D21A4FU49 640 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 MPZL1O95297 269 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 SPI1P17947 270 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 CCKARP32238 428 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 UBE2NP61088 152 aaKnown RBP13.46□□□□□ -0.25
CNOT9-205ENST00000433439 IL5RAQ01344 420 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 GABRA6Q16445 453 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 TBRG1Q3YBR2 411 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 C6orf52Q5T4I8 152 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 TTC23Q5W5X9 447 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 BBS1Q8NFJ9 593 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 LINC01560Q8TB33 94 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 TMEM163Q8TC26 289 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 ZNRF4Q8WWF5 429 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 BCL2L2Q92843 193 aaPredicted RBP13.46□□□□□ -0.25
CNOT9-205ENST00000433439 PTP4A1Q93096 173 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 PITX2Q99697 317 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 SH3GL3Q99963 347 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 EMC7Q9NPA0 242 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 NDRG4Q9ULP0 352 aaKnown RBP13.46□□□□□ -0.25
CNOT9-205ENST00000433439 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
CNOT9-205ENST00000433439 IGLV1-36A0A0B4J1U3 117 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 TVP23AA6NH52 213 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 SLC16A6O15403 523 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 FARS2O95363 451 aaKnown RBP13.45□□□□□ -0.26
CNOT9-205ENST00000433439 OR8G3PP0DMU2 310 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 LAP3P28838 519 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 CAPGP40121 348 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 ZNF133P52736 654 aaPredicted RBP13.45□□□□□ -0.26
CNOT9-205ENST00000433439 SLC25A1P53007 311 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 APOFQ13790 326 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 MEP1BQ16820 701 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 OR7E24Q6IFN5 339 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 LYPD4Q6UWN0 246 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 B3GLCTQ6Y288 498 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 WFDC8Q8IUA0 241 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 GLB1L2Q8IW92 636 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 DEPDC4Q8N2C3 294 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 SLC22A24Q8N4F4 322 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 MUS81Q96NY9 551 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 APOL4Q9BPW4 351 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 MED18Q9BUE0 208 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 C1QTNF6Q9BXI9 259 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 RACGAP1Q9H0H5 632 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 ZNF226Q9NYT6 803 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 DNAJC27Q9NZQ0 273 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 POLR1DQ9Y2S0 133 aa13.45□□□□□ -0.26
CNOT9-205ENST00000433439 HCFC1P51610 2035 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 TUBAL3A6NHL2 446 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 OR5H1A6NKK0 313 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 CLDN1O95832 211 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 SCG5P05408 212 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 PATE4P0C8F1 98 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 CD79AP11912 226 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 MSR1P21757 451 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 ADARB1P78563 741 aaKnown RBP13.44□□□□□ -0.26
CNOT9-205ENST00000433439 MRPS34P82930 218 aaKnown RBP13.44□□□□□ -0.26
CNOT9-205ENST00000433439 GLO1Q04760 184 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 PIGFQ07326 219 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 KEAP1Q14145 624 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 UGT2A3Q6UWM9 527 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 ZBTB46Q86UZ6 589 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 SKA3Q8IX90 412 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 ZNF511Q8NB15 262 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 C1orf162Q8NEQ5 155 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-205ENST00000433439 OR10H5Q8NGA6 315 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 C11orf40Q8WZ69 217 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 MUCL1Q96DR8 90 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 ZMYND19Q96E35 227 aaPredicted RBP13.44□□□□□ -0.26
CNOT9-205ENST00000433439 WFIKKN1Q96NZ8 548 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 NMNAT2Q9BZQ4 307 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 KCNN2Q9H2S1 579 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 RNF121Q9H920 327 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 POLE4Q9NR33 117 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 SLC17A5Q9NRA2 495 aa13.44□□□□□ -0.26
CNOT9-205ENST00000433439 NDRG3Q9UGV2 375 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms