RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 HIST1H2AGP0C0S8 130 aaPredicted RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PSG1P11464 419 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 EPCAMP16422 314 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ENGP17813 658 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 EGR1P18146 543 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 HIST1H2ADP20671 130 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 GABRA2P47869 451 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 REG1BP48304 166 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SLC25A53Q5H9E4 307 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 HIST2H2AA3Q6FI13 130 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM71Q6P5X7 295 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 FGFRL1Q8N441 504 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 OR56B4Q8NH76 319 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 TMEM19Q96HH6 336 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 HIST1H2AHQ96KK5 128 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SGK494Q96LW2 274 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 IP6K3Q96PC2 410 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 LYSMD1Q96S90 227 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 HIST1H2AJQ99878 128 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PDCD2LQ9BRP1 358 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PCGF1Q9BSM1 259 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 NXF5Q9H1B4 397 aaKnown RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 TXNIPQ9H3M7 391 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ADGRL3Q9HAR2 1447 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 AMBNQ9NP70 447 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ACKR4Q9NPB9 350 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 VNN3Q9NY84 501 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF629Q9UEG4 869 aaPredicted RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 RIMS3Q9UJD0 308 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SLC25A13Q9UJS0 675 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PLAGL1Q9UM63 463 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 NSG2Q9Y328 171 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 INSIG2Q9Y5U4 225 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 C3P01024 1663 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CHD4Q14839 1912 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 NOS1P29475 1434 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 C13orf42A0A1B0GVH6 325 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SH2D7A6NKC9 451 aaPredicted RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 K7EP13 123 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CYB561D2O14569 222 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 FCMRO60667 390 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CDRT1O95170 752 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 IFNA1P01562 189 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ADH4P08319 380 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF865P0CJ78 1059 aaPredicted RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 POLR2IP36954 125 aaKnown RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 RFX3P48380 749 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 EIF5AP63241 154 aaKnown RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PAX2Q02962 417 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 EIF3IQ13347 325 aaKnown RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 TNK1Q13470 666 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CDH18Q13634 790 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CPSF6Q16630 551 aaKnown RBP eCLIP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CYP1B1Q16678 543 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 MSS51Q4VC12 460 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SIRPB2Q5JXA9 342 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CES5AQ6NT32 575 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF773Q6PK81 442 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PARS2Q7L3T8 475 aaKnown RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF367Q7RTV3 350 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 RNF144BQ7Z419 303 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 C4orf19Q8IY42 314 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SMPDL3BQ92485 455 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 LGALS12Q96DT0 336 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 LIN37Q96GY3 246 aaPredicted RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 CAPNS2Q96L46 248 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 TSSK2Q96PF2 358 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 OR2V2Q96R30 315 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 NODALQ96S42 347 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SLC30A2Q9BRI3 323 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 C16orf70Q9BSU1 422 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 SMOC2Q9H3U7 446 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 PRDM12Q9H4Q4 367 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 OSER1Q9NX31 292 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 ZNF490Q9ULM2 529 aaPredicted RBP4.88□□□□□ -1.63
PTPN4-203ENST00000430976 TPRKBQ9Y3C4 175 aa4.88□□□□□ -1.63
PTPN4-203ENST00000430976 BCL9O00512 1426 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 HIDE1A8MVS5 230 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MKRN2OSH3BPM6 223 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SEMA7AO75326 666 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 MT-ND4LP03901 98 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 HRH1P35367 487 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 HCCSP53701 268 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CLDN18P56856 261 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ERVFC1-1P60608 527 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CDO1Q16878 200 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ADPRMQ3LIE5 342 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 TTLL9Q3SXZ7 439 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ANXA2RQ3ZCQ2 193 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CCSMST1Q4G0I0 132 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 LYPLAL1Q5VWZ2 237 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 OR2T2Q6IF00 324 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 FAM71F2Q6NXP2 309 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 BLOC1S3Q6QNY0 202 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 GLCCI1Q86VQ1 547 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 ZDHHC23Q8IYP9 409 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 SLC34A3Q8N130 599 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 FAM24BQ8N5W8 94 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 PACRGLQ8N7B6 248 aa4.87□□□□□ -1.63
PTPN4-203ENST00000430976 CDRT4Q8N9R6 151 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms