RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PPOXP50336 477 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 RPS23P62266 143 aaKnown RBP8.48□□□□□ -1.05
HDAC6-207ENST00000430858 ERVK-25P63136 954 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 PLP2Q04941 152 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 FMODQ06828 376 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 TRIM25Q14258 630 aaKnown RBP8.48□□□□□ -1.05
HDAC6-207ENST00000430858 SEC23BQ15437 767 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 TBC1D28Q2M2D7 210 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 GPR139Q6DWJ6 353 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 CYP2R1Q6VVX0 501 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 FAM122BQ7Z309 247 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 ZNF584Q8IVC4 421 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 ZDHHC21Q8IVQ6 265 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 LRRC18Q8N456 261 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 SLC30A7Q8NEW0 376 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 OR10H5Q8NGA6 315 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 OR1J2Q8NGS2 313 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 HTRA1Q92743 480 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 NABP1Q96AH0 204 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 RSRC1Q96IZ7 334 aaKnown RBP8.48□□□□□ -1.05
HDAC6-207ENST00000430858 GPX7Q96SL4 187 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-207ENST00000430858 DOK1Q99704 481 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 REG4Q9BYZ8 158 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 C1orf21Q9H246 121 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 LRMDAQ9H2I8 198 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 CCNB1IP1Q9NPC3 277 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 NRIP3Q9NQ35 241 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 SLC7A8Q9UHI5 535 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 PRPF19Q9UMS4 504 aaKnown RBP8.48□□□□□ -1.05
HDAC6-207ENST00000430858 ADAM18Q9Y3Q7 739 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 UGT2A1Q9Y4X1 527 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 FKBP7Q9Y680 259 aa8.48□□□□□ -1.05
HDAC6-207ENST00000430858 HEATR1Q9H583 2144 aaKnown RBP8.48□□□□□ -1.05
HDAC6-207ENST00000430858 ACANP16112 2415 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 UNC119BA6NIH7 251 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 RNF223E7ERA6 249 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 OR10H3O60404 316 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 KRT36O76013 467 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 SNAP29O95721 258 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 LY6G6DO95868 133 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 ERCC1P07992 297 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-207ENST00000430858 MMP7P09237 267 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-207ENST00000430858 APEHP13798 732 aaKnown RBP8.47□□□□□ -1.05
HDAC6-207ENST00000430858 ATP6V1B2P21281 511 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 SDHAP31040 664 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 RRM2P31350 389 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 RPS6KA3P51812 740 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 HSF2Q03933 536 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 SGCAQ16586 387 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 MESTQ5EB52 335 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 FAM27BQ5VT28 67 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 LCN8Q6JVE9 175 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 SMARCD3Q6STE5 483 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 DPY19L2P2Q6ZN68 376 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 RINLQ6ZS11 566 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 FOXL2NBQ6ZUU3 175 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 TRPM8Q7Z2W7 1104 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 ZER1Q7Z7L7 766 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 DHFR2Q86XF0 187 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 SVOPLQ8N434 492 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 CLDN22Q8N7P3 220 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 BCAS4Q8TDM0 211 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 MRPL24Q96A35 216 aaKnown RBP8.47□□□□□ -1.05
HDAC6-207ENST00000430858 Q96M85 177 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 ZNF570Q96NI8 536 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 SORCS2Q96PQ0 1159 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 VRK1Q99986 396 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-207ENST00000430858 WACQ9BTA9 647 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 RAB1BQ9H0U4 201 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 MAGIXQ9H6Y5 334 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 CDH20Q9HBT6 801 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 MYOZ1Q9NP98 299 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-207ENST00000430858 TAS2R1Q9NYW7 299 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 TMCC3Q9ULS5 477 aa8.47□□□□□ -1.05
HDAC6-207ENST00000430858 IGHV4-30-2A0A087WSY4 118 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 TEX13CA0A0J9YWL9 993 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 A0A1W2PPL8 197 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 TCRBV5S2A0A599 114 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 TMEM129A0AVI4 362 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 PRSS37A4D1T9 235 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 H7C1C5 153 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 GPRIN2O60269 458 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 STAMBPO95630 424 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 TXNDC12O95881 172 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 CST2P09228 141 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 SLC25A16P16260 332 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 ZNF32P17041 273 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 MSR1P21757 451 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 FPR3P25089 353 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 PCSK6P29122 969 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 APLNRP35414 380 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 RAD52P43351 418 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 MAGEA2P43356 314 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 HMGA2P52926 109 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 FXYD6P3P58550 94 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 PCBD1P61457 104 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 LCN6P62502 163 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 KRR1Q13601 381 aaKnown RBP8.46□□□□□ -1.06
HDAC6-207ENST00000430858 PABPC1L2AQ5JQF8 200 aa8.46□□□□□ -1.06
HDAC6-207ENST00000430858 C1orf94Q6P1W5 598 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms