RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-207ENST00000429896 EFNA3P52797 238 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 RAB40BQ12829 278 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 GSG1LQ6UXU4 331 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
PTCH1-207ENST00000429896 NDRG3Q9UGV2 375 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 ZNF593O00488 134 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-207ENST00000429896 DAPP51397 102 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 SEC61A1P61619 476 aaKnown RBP11.71□□□□□ -0.53
PTCH1-207ENST00000429896 PCGF3Q3KNV8 242 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 LCN10Q6JVE6 187 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 OBP2BQ9NPH6 170 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 NPIPB8E9PQR5 432 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 SERPINA2P20848 420 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 ART1P52961 327 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 TMEM52Q8NDY8 209 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 SCNM1Q9BWG6 230 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 MMP27Q9H306 513 aa11.71□□□□□ -0.53
PTCH1-207ENST00000429896 UCHL1P09936 223 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 NCS1P62166 190 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 SCGB2A2Q13296 93 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 TIGD3Q6B0B8 471 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 ELP2Q6IA86 826 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 BBS1Q8NFJ9 593 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 SLAMF9Q96A28 289 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 C7orf72A4D263 438 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 MRPS14O60783 128 aaKnown RBP11.71□□□□□ -0.54
PTCH1-207ENST00000429896 APOC3P02656 99 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 UGT2B10P36537 528 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 DYRK1AQ13627 763 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 SPHARQ15513 63 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 FXNQ16595 210 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 TBC1D28Q2M2D7 210 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 FBXW12Q6X9E4 464 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 POC1BQ8TC44 478 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF721Q8TF20 911 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 DCUN1D4Q92564 292 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 ALG12Q9BV10 488 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 FUNDC2Q9BWH2 189 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 SPAG17Q6Q759 2223 aa11.71□□□□□ -0.54
PTCH1-207ENST00000429896 H3BMQ9 156 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 NFATC3Q12968 1075 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF322Q6U7Q0 402 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ESPNLQ6ZVH7 1005 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 NDNFQ8TB73 568 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 OIT3Q8WWZ8 545 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 COG8Q96MW5 612 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ARHGDIGQ99819 225 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 C1orf198Q9H425 327 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 INPP5EQ9NRR6 644 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 SIRT3Q9NTG7 399 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 B3GALT5Q9Y2C3 310 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 TSC2P49815 1807 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 CX3CR1P49238 355 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 CXCR4P61073 352 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 MYBPHQ13203 477 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 OR4C3Q8NH37 302 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 OR1S1Q8NH92 325 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 SAV1Q9H4B6 383 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 SLC6A13Q9NSD5 602 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 LOC101059948A0A1B0GTJ6 334 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 SHISA8B8ZZ34 492 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 SERPINA5P05154 406 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 CHDHQ8NE62 594 aaPredicted RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 IL17RDQ8NFM7 739 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 PIGCQ92535 297 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 RASD2Q96D21 266 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 VSTM2LQ96N03 204 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 OSGIN1Q9UJX0 560 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 FOXL2P58012 376 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 KIRREL2Q6UWL6 708 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 MOB3CQ70IA8 216 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 MS4A15Q8N5U1 240 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 FAIMQ9NVQ4 179 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 STUB1Q9UNE7 303 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 CCL27Q9Y4X3 112 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ASPDHA6ND91 283 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 NCR1O76036 304 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 TMEM205Q6UW68 189 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 PIWIL3Q7Z3Z3 882 aaKnown RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 FAM109AQ8N4B1 249 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 CRHBPP24387 322 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 MAP2K3P46734 347 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF141Q15928 474 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 CISD2Q8N5K1 135 aaKnown RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 FCRL1Q96LA6 429 aa11.7□□□□□ -0.54
PTCH1-207ENST00000429896 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
PTCH1-207ENST00000429896 PLXNA3P51805 1871 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 HRKO00198 91 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 SULT1B1O43704 296 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ERVK-16P61578 105 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 C9orf40Q8IXQ3 194 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 TMEM72A0PK05 275 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 ZNF26P17031 533 aaPredicted RBP11.69□□□□□ -0.54
PTCH1-207ENST00000429896 RAB3BP20337 219 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 PPP5CP53041 499 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 FAPQ12884 760 aa11.69□□□□□ -0.54
PTCH1-207ENST00000429896 MFAP5Q13361 173 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms