RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 DECR2Q9NUI1 292 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 SH3GLB1Q9Y371 365 aa12.71□□□□□ -0.37
MSH5-208ENST00000429846 HMGB1P1B2RPK0 211 aaPredicted RBP12.7□□□□□ -0.38
MSH5-208ENST00000429846 CLDN25C9JDP6 229 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 IGHV3-13P01766 116 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TSPAN19P0C672 248 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 THRBP10828 461 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 FUT1P19526 365 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 RUNX1T1Q06455 604 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TAF11Q15544 211 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 ACSM5Q6NUN0 579 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 USP43Q70EL4 1123 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 LRRC18Q8N456 261 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 SYT14Q8NB59 555 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 ICA1LQ8NDH6 482 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 OR8J3Q8NGG0 315 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 PFN4Q8NHR9 129 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TMEM255BQ8WV15 326 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TMEM239Q8WW34 195 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TIMD4Q96H15 378 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TSPAN32Q96QS1 320 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 OR51B6Q9H340 312 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 NANOGQ9H9S0 305 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 G6PC2Q9NQR9 355 aa12.7□□□□□ -0.38
MSH5-208ENST00000429846 TANC2Q9HCD6 1990 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 A0A0X1KG70 313 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 HTR3EA5X5Y0 456 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 TPD52L2O43399 206 aaKnown RBP12.69□□□□□ -0.38
MSH5-208ENST00000429846 CDC14BO60729 498 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 VENTXO95231 258 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 IFNA14P01570 189 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 STOMP27105 288 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 GCH1P30793 250 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 AQP2P41181 271 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 HFEQ30201 348 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 COQ5Q5HYK3 327 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 PABPC1L2AQ5JQF8 200 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 ARMC4Q5T2S8 1044 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 NANOGP8Q6NSW7 305 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 FAHD2BQ6P2I3 314 aaPredicted RBP12.69□□□□□ -0.38
MSH5-208ENST00000429846 ERICH5Q6P6B1 374 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 USP51Q70EK9 711 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 NKAIN4Q8IVV8 208 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 CPEB3Q8NE35 698 aaKnown RBP12.69□□□□□ -0.38
MSH5-208ENST00000429846 OR4M2Q8NGB6 313 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 OR1J1Q8NGS3 322 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 FNDC8Q8TC99 324 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 ELMOD3Q96FG2 381 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 THOC1Q96FV9 657 aaKnown RBP12.69□□□□□ -0.38
MSH5-208ENST00000429846 FAHD2AQ96GK7 314 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 JMJD8Q96S16 334 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 ECSITQ9BQ95 431 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 NPHS2Q9NP85 383 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 C20orf141Q9NUB4 165 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 EIF3KQ9UBQ5 218 aaKnown RBP12.69□□□□□ -0.38
MSH5-208ENST00000429846 CGGBP1Q9UFW8 167 aaPredicted RBP12.69□□□□□ -0.38
MSH5-208ENST00000429846 MED31Q9Y3C7 131 aa12.69□□□□□ -0.38
MSH5-208ENST00000429846 WNK2Q9Y3S1 2297 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 A0A0G2JND7 137 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 PLSCR5A0PG75 271 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 H3BSA7 217 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 J3QLI3 93 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 ICMTO60725 284 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 EDF1O60869 148 aaKnown RBP12.68□□□□□ -0.38
MSH5-208ENST00000429846 DEAF1O75398 565 aaPredicted RBP12.68□□□□□ -0.38
MSH5-208ENST00000429846 MPZL1O95297 269 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 SLC2A10O95528 541 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 NPPAP01160 153 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 EPHA1P21709 976 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 GATA3P23771 443 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 LIPAP38571 399 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 ZNF81P51508 661 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 HILS1P60008 231 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 MVKQ03426 396 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 CD47Q08722 323 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 RABL3Q5HYI8 236 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 CALHM3Q86XJ0 350 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 RAB1CQ92928 201 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 NABP1Q96AH0 204 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 NMD3Q96D46 503 aaKnown RBP12.68□□□□□ -0.38
MSH5-208ENST00000429846 POM121L2Q96KW2 1035 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 RIMS3Q9UJD0 308 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 HIF3AQ9Y2N7 669 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
MSH5-208ENST00000429846 BBIP1A8MTZ0 92 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 TRIM77I1YAP6 450 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 FXYD1O00168 92 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 FBP2O00757 339 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 ADH4P08319 380 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 ZNF32P17041 273 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 CCNOP22674 350 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 CFPP27918 469 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 IFNA8P32881 189 aa12.67□□□□□ -0.38
MSH5-208ENST00000429846 COMPP49747 757 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms