RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SLC18B1Q6NT16 456 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 GLB1L2Q8IW92 636 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 NEIL3Q8TAT5 605 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 CLDN25C9JDP6 229 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 EIF1AYO14602 144 aaKnown RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 GPRIN2O60269 458 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 AQP8O94778 261 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 CDRT1O95170 752 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 ENPP1P22413 925 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 GDI2P50395 445 aaKnown RBP13.53□□□□□ -0.24
ACTB-204ENST00000425660 CARD18P57730 90 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 CLRN1P58418 232 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 CAMK2DQ13557 499 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 HBMQ6B0K9 141 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 TMEM251Q8N6I4 163 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 FDCSPQ8NFU4 85 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 OR9K2Q8NGE7 335 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 OR2V1Q8NHB1 315 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 ABHD4Q8TB40 342 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 S100ZQ8WXG8 99 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 FOXN4Q96NZ1 517 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 OR8B4Q96RC9 309 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 AMELYQ99218 206 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 TTYH2Q9BSA4 534 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 PLGRKTQ9HBL7 147 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 SNTG1Q9NSN8 517 aa13.53□□□□□ -0.24
ACTB-204ENST00000425660 TRBV2A0A0J9YWF9 115 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 CD8B2A6NJW9 211 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 ZNF726A6NNF4 738 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 PSMD9O00233 223 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 ZNF432O94892 652 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 MPZL1O95297 269 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 CD8BP10966 210 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 NR2C1P13056 603 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 MAGEA5P43359 124 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 MEOX1P50221 254 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 TNFSF10P50591 281 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 ZNF133P52736 654 aaPredicted RBP13.52□□□□□ -0.25
ACTB-204ENST00000425660 NANOS3P60323 173 aaKnown RBP13.52□□□□□ -0.25
ACTB-204ENST00000425660 RPS11P62280 158 aaKnown RBP eCLIP13.52□□□□□ -0.251e-9■□□□□ 9
ACTB-204ENST00000425660 ARG2P78540 354 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 TRILQ7L0X0 811 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 ZNF679Q8IYX0 411 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 ZIC4Q8N9L1 334 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 TEX19Q8NA77 164 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 OR10D3Q8NH80 312 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 THEM6Q8WUY1 208 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 HMG20AQ9NP66 347 aa13.52□□□□□ -0.25
ACTB-204ENST00000425660 ING1Q9UK53 422 aaPredicted RBP13.52□□□□□ -0.25
ACTB-204ENST00000425660 IGHV3-15A0A0B4J1V0 119 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 SHISA3A0PJX4 238 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 TLX3O43711 291 aaPredicted RBP13.51□□□□□ -0.25
ACTB-204ENST00000425660 CEACAM4O75871 244 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 SERPINA3P01011 423 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 CELA3AP09093 270 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 SPARCP09486 303 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 EDNRAP25101 427 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 RFC3P40938 356 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 MTNR1BP49286 362 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 STARP49675 285 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 LHX2P50458 406 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 CLDN17P56750 224 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 MEP1BQ16820 701 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 ABLIM2Q6H8Q1 611 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 FDX2Q6P4F2 183 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 SLC25A47Q6Q0C1 308 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 TMEM123Q8N131 208 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 MFSD4AQ8N468 514 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 TMEM178AQ8NBL3 297 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 BORCS5Q969J3 196 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 CPNE4Q96A23 557 aaPredicted RBP13.51□□□□□ -0.25
ACTB-204ENST00000425660 ZNF385AQ96PM9 386 aaKnown RBP13.51□□□□□ -0.25
ACTB-204ENST00000425660 ABHD6Q9BV23 337 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
ACTB-204ENST00000425660 ACKR4Q9NPB9 350 aa13.51□□□□□ -0.25
ACTB-204ENST00000425660 ZNF716A6NP11 495 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 NPIPA2E9PIF3 369 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 NPIPA3F8WFD2 350 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 DVL2O14641 736 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ZFPL1O95159 310 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ZNF823P16415 610 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 LAP3P28838 519 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PSMB10P40306 273 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 CCL11P51671 97 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 MXD1Q05195 221 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ZNF766Q5HY98 468 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 KCTD18Q6PI47 426 aaPredicted RBP13.5□□□□□ -0.25
ACTB-204ENST00000425660 LRFN4Q6PJG9 635 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 YIPF7Q8N8F6 280 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 OR52N5Q8NH56 324 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 ST7LQ8TDW4 575 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 HSD17B8Q92506 261 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 MAP6Q96JE9 813 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 OR2M2Q96R28 347 aa13.5□□□□□ -0.25
ACTB-204ENST00000425660 PDCD1LG2Q9BQ51 273 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms