RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF345Q14585 488 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF585AQ6P3V2 769 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 TMCO2Q7Z6W1 182 aaPredicted RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 RTN4RL2Q86UN3 420 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 BAP18Q8IXM2 172 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 CDK20Q8IZL9 346 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 OR7G2Q8NG99 324 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 TCTEX1D2Q8WW35 142 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 TFGQ92734 400 aaPredicted RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 PIK3IP1Q96FE7 263 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 POM121Q96HA1 1249 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC6A7Q99884 636 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 AIF1LQ9BQI0 150 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 ZDHHC5Q9C0B5 715 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 NRSN2Q9GZP1 204 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM27Q9HBJ8 222 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 KCNE5Q9UJ90 142 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 AMDHD2Q9Y303 409 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 EYSQ5T1H1 3165 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 XRCC3O43542 346 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 TGM5O43548 720 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 DNAJB6O75190 326 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB6AP20340 208 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 CSNK1EP49674 416 aaKnown RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB2AP61019 212 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 IL13RA1P78552 427 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 HGFACQ04756 655 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 DUSP5Q16690 384 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 RNF44Q7L0R7 432 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 ADAD2Q8NCV1 583 aaKnown RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 RNF141Q8WVD5 230 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 NEU1Q99519 415 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 VN1R3Q9BXE9 311 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 SRA1Q9HD15 236 aaKnown RBP10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 SMCO4Q9NRQ5 59 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 FRRS1LQ9P0K9 344 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 COL4A3Q01955 1670 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 CHD7Q9P2D1 2997 aa10.25□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM235A6NFC5 223 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 BLOC1S5-TXNDC5H3BN57 136 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 LRP3O75074 770 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 MED6O75586 246 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RCBTB2O95199 551 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 SLC34A2O95436 690 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CTSLP07711 333 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB40ALP0C0E4 278 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 MNDAP41218 407 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 MAPK8P45983 427 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 MOGAT2Q3SYC2 334 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 GFI1BQ5VTD9 330 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 TMEM25Q86YD3 366 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 OR2L13Q8N349 312 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 BPIFB2Q8N4F0 458 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 POMGNT2Q8NAT1 580 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CLEC1AQ8NC01 280 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 OR4K17Q8NGC6 315 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ST7LQ8TDW4 575 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB40AQ8WXH6 277 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CMBLQ96DG6 245 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ZNF223Q9UK11 482 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 VSIG4Q9Y279 399 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 SPAG17Q6Q759 2223 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 DCTN6O00399 190 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CSF1P09603 554 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 NDUFA6P56556 154 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 PJVKQ0ZLH3 352 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 C2orf76Q3KRA6 126 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 TRMT12Q53H54 448 aaKnown RBP10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 AWAT1Q58HT5 328 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 KLHDC8AQ8IYD2 350 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ARRDC1Q8N5I2 433 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ACOT4Q8N9L9 421 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 WDR34Q96EX3 536 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 SMIM3Q9BZL3 60 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB33BQ9H082 229 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 TOLLIPQ9H0E2 274 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 LAMA1P25391 3075 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 LEFTY2O00292 366 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ADAP1O75689 374 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 PMS2P2O95744 297 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 OR8U9P0C7N5 309 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 FAM157CP0CG43 387 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 TSFMP43897 325 aaKnown RBP10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 LSSP48449 732 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CEBPGP53567 150 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RAB4BP61018 213 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 EBPQ15125 230 aaKnown RBP10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 LRRC69Q6ZNQ3 347 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ZAR1Q86SH2 424 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 NPAS4Q8IUM7 802 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 ZSCAN4Q8NAM6 433 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 OR8U1Q8NH10 309 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 UBE2E3Q969T4 207 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RNF208Q9H0X6 261 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 RHBGQ9H310 441 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CGGBP1Q9UFW8 167 aaPredicted RBP10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 MSRAQ9UJ68 235 aa10.24□□□□□ -0.77
SEC61A1-202ENST00000424880 CCL26Q9Y258 94 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms