RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 OC90Q02509 493 aaPredicted RBP8.96□□□□□ -0.97
USP54-205ENST00000424265 SSX1Q16384 188 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 TMEM201Q5SNT2 666 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 LRIF1Q5T3J3 769 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 ZNF660Q6AZW8 331 aaPredicted RBP8.96□□□□□ -0.97
USP54-205ENST00000424265 ADNP2Q6IQ32 1131 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 HSD17B11Q8NBQ5 300 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 GNPDA2Q8TDQ7 276 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 SCARF2Q96GP6 870 aaPredicted RBP8.96□□□□□ -0.97
USP54-205ENST00000424265 MKKSQ9NPJ1 570 aaPredicted RBP8.96□□□□□ -0.97
USP54-205ENST00000424265 TUBG2Q9NRH3 451 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 PLEKHB1Q9UF11 243 aaPredicted RBP8.96□□□□□ -0.97
USP54-205ENST00000424265 CARHSP1Q9Y2V2 147 aaKnown RBP8.96□□□□□ -0.97
USP54-205ENST00000424265 ZNF705FA8MVS1 300 aaPredicted RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 M0R129 80 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 AQP7O14520 342 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 B4GALT2O60909 372 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 SCGB1D1O95968 90 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 ZNF705DP0CH99 300 aaPredicted RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 ZNF705BP0CI00 300 aaPredicted RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 MAKP20794 623 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 PRPH2P23942 346 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 CDH12P55289 794 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 RAP1AP62834 184 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 IHHQ14623 411 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 LRRC37A5PQ49AS3 106 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 PRAMEF20Q5VT98 475 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 ZNF761Q86XN6 746 aaPredicted RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 LGI4Q8N135 537 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 LINC00471Q8N535 108 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 WDR34Q96EX3 536 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 MARS2Q96GW9 593 aaKnown RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 H2AFY2Q9P0M6 372 aaPredicted RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 EREGO14944 169 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 AGPAT2O15120 278 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 HOXB5P09067 269 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 HOXA5P20719 270 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 FOXK1P85037 733 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 SLC22A25Q6T423 547 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 C11orf42Q8N5U0 333 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 BEND2Q8NDZ0 799 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 PROKR1Q8TCW9 393 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 APIPQ96GX9 242 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 URM1Q9BTM9 101 aaKnown RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 TSSK6Q9BXA6 273 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 TMPRSS13Q9BYE2 586 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 TLNRD1Q9H1K6 362 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 ADAP2Q9NPF8 381 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.96□□□□□ -0.98
USP54-205ENST00000424265 A0A1B0GVC2 190 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 NAP1L6A6NFF2 107 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 A6NIN4 97 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 NUDT14O95848 222 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 IFNW1P05000 195 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 MSR1P21757 451 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 BCKDHBP21953 392 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 GIPRP48546 466 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 AGFG1P52594 562 aaKnown RBP8.96□□□□□ -0.98
USP54-205ENST00000424265 MC1RQ01726 317 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 SLC14A1Q13336 389 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 SCARB2Q14108 478 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 GCNT2Q8N0V5 402 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 FAM26EQ8N5C1 309 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 NETO1Q8TDF5 533 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 HSH2DQ96JZ2 352 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 INTS14Q96SY0 518 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 C20orf24Q9BUV8 137 aa8.96□□□□□ -0.98
USP54-205ENST00000424265 ANKUB1A6NFN9 424 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 EFSO43281 561 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 ELK1P19419 428 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 PSMB1P20618 241 aaKnown RBP8.95□□□□□ -0.98
USP54-205ENST00000424265 SCGB2A2Q13296 93 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 IFI44LQ53G44 452 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 BEX5Q5H9J7 111 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 TMEM108Q6UXF1 575 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 ZNF547Q8IVP9 402 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 SPICQ8N5J4 248 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 APH1BQ8WW43 257 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 ISOC2Q96AB3 205 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 LPAR4Q99677 370 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 DPH2Q9BQC3 489 aaPredicted RBP8.95□□□□□ -0.98
USP54-205ENST00000424265 ZNF649Q9BS31 505 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 FNDC11Q9BVV2 318 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 DNAJC4Q9NNZ3 241 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 A0A1W2PPE3 182 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 PTBP3O95758 552 aaKnown RBP8.95□□□□□ -0.98
USP54-205ENST00000424265 CDKN1BP46527 198 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 GAB1Q13480 694 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 MOGAT2Q3SYC2 334 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 KLHL24Q6TFL4 600 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 IL34Q6ZMJ4 242 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 BBS1Q8NFJ9 593 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 MICU1Q9BPX6 476 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 CDV3Q9UKY7 258 aaKnown RBP8.95□□□□□ -0.98
USP54-205ENST00000424265 A0A1B0GUH1 482 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 OR2C1O95371 312 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 CST2P09228 141 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 STAG3L3P0CL85 134 aa8.95□□□□□ -0.98
USP54-205ENST00000424265 RCC1P18754 421 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms