RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ZNF35P13682 527 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 FPR3P25089 353 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 IFNGR2P38484 337 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 FXYD6P3P58550 94 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 SNRPD2P62316 118 aaKnown RBP22.84■■□□□ 1.25
CDK9-202ENST00000421939 KRR1Q13601 381 aaKnown RBP22.84■■□□□ 1.25
CDK9-202ENST00000421939 DAG1Q14118 895 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 SWI5Q1ZZU3 235 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 CLEC12BQ2HXU8 276 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 MST1LQ2TV78 715 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 DNAL1Q4LDG9 190 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 KRT80Q6KB66 452 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 LRRC18Q8N456 261 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 FANK1Q8TC84 345 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 POP5Q969H6 163 aaKnown RBP22.84■■□□□ 1.25
CDK9-202ENST00000421939 NRIP3Q9NQ35 241 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 PMF1-BGLAPU3KQ54 211 aa22.84■■□□□ 1.25
CDK9-202ENST00000421939 TEX13CA0A0J9YWL9 993 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 KRT36O76013 467 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 INHBBP09529 407 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 SDHAP31040 664 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 THBS4P35443 961 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 EFNB3Q15768 340 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 GPR139Q6DWJ6 353 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 SMARCD3Q6STE5 483 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 RASD2Q96D21 266 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 LRGUKQ96M69 825 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 IL20RAQ9UHF4 553 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 LYVE1Q9Y5Y7 322 aa22.83■■□□□ 1.25
CDK9-202ENST00000421939 SLC22A23A1A5C7 686 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 B9A039 149 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 STAMBPO95630 424 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 MMP7P09237 267 aaPredicted RBP22.82■■□□□ 1.24
CDK9-202ENST00000421939 NR4A1P22736 598 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 RAB35Q15286 201 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 SGCAQ16586 387 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 FAM98BQ52LJ0 330 aaKnown RBP22.82■■□□□ 1.24
CDK9-202ENST00000421939 DPY19L2P2Q6ZN68 376 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 FOXL2NBQ6ZUU3 175 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 CIARTQ8N365 385 aaPredicted RBP22.82■■□□□ 1.24
CDK9-202ENST00000421939 SLC30A7Q8NEW0 376 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 TRIM15Q9C019 465 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 KCNN2Q9H2S1 579 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 C1orf198Q9H425 327 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 SPEF1Q9Y4P9 236 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 ARFGEF3Q5TH69 2177 aa22.82■■□□□ 1.24
CDK9-202ENST00000421939 PRSS37A4D1T9 235 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 VSTM5A8MXK1 200 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 GYG2O15488 501 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 AHCYL1O43865 530 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 NUDT6P53370 316 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 GALK2Q01415 458 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 BIVMQ86UB2 503 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 PLK3Q9H4B4 646 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 CCNB1IP1Q9NPC3 277 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 IER3IP1Q9Y5U9 82 aa22.81■■□□□ 1.24
CDK9-202ENST00000421939 A0A1W2PPL8 197 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 TNFRSF11BO00300 401 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 ACOT8O14734 319 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 SSX4O60224 188 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 GUCA1AP43080 201 aaPredicted RBP22.8■■□□□ 1.24
CDK9-202ENST00000421939 GSSP48637 474 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 HMGA2P52926 109 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 PLP2Q04941 152 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 TNK1Q13470 666 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 FAM27BQ5VT28 67 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 PGBD2Q6P3X8 592 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 ADCK1Q86TW2 530 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 OR52D1Q9H346 318 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 SLC7A8Q9UHI5 535 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 ZANQ9Y493 2812 aa22.8■■□□□ 1.24
CDK9-202ENST00000421939 SETD2Q9BYW2 2564 aaPredicted RBP22.8■■□□□ 1.24
CDK9-202ENST00000421939 IQCMA0A1B0GVH7 501 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 SOCS2O14508 198 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 TXNDC12O95881 172 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 PTHP01270 115 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 APEHP13798 732 aaKnown RBP22.79■■□□□ 1.24
CDK9-202ENST00000421939 SLC6A6P31641 620 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 RPS6KA3P51812 740 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 HSF2Q03933 536 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 TRAP1Q12931 704 aaKnown RBP22.79■■□□□ 1.24
CDK9-202ENST00000421939 C1orf94Q6P1W5 598 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 DNM1P46Q6ZS02 220 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 OR4C15Q8NGM1 316 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 GNPDA2Q8TDQ7 276 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 SLC7A6OSQ96CW6 309 aaPredicted RBP22.79■■□□□ 1.24
CDK9-202ENST00000421939 GSX1Q9H4S2 264 aaPredicted RBP22.79■■□□□ 1.24
CDK9-202ENST00000421939 CDH20Q9HBT6 801 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 CMAHPQ9Y471 501 aa22.79■■□□□ 1.24
CDK9-202ENST00000421939 SMAD7O15105 426 aaKnown RBP22.78■■□□□ 1.24
CDK9-202ENST00000421939 GPRIN2O60269 458 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 PPP1R3DO95685 299 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 ZNF32P17041 273 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 MSR1P21757 451 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 LAP3P28838 519 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 RPS23P62266 143 aaKnown RBP22.78■■□□□ 1.24
CDK9-202ENST00000421939 TSPAN31Q12999 210 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 TBC1D28Q2M2D7 210 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 RFX4Q33E94 735 aa22.78■■□□□ 1.24
CDK9-202ENST00000421939 PABPC1L2AQ5JQF8 200 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms