RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 WNT2BQ93097 391 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 MUL1Q969V5 352 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 APH1AQ96BI3 265 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 SNRNP40Q96DI7 357 aaKnown RBP15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 GMPPAQ96IJ6 420 aaPredicted RBP15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TM9SF2Q99805 663 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 YIPF3Q9GZM5 350 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 SLCO5A1Q9H2Y9 848 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ERVK13-1Q9NX77 482 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 UPB1Q9UBR1 384 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 LAMP5Q9UJQ1 280 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 EMC9Q9Y3B6 208 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 PRRG2O14669 202 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 GPANK1O95872 356 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TTKP33981 857 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ALDH3B2P48448 385 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ENTPD1P49961 510 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 PER3P56645 1201 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 WNT4P56705 351 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ACTA2P62736 377 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ACTG2P63267 376 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 HSF2Q03933 536 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 HIST3H3Q16695 136 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 C1orf185Q5T7R7 199 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF324BQ6AW86 544 aaPredicted RBP15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 XAF1Q6GPH4 301 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 SLC25A47Q6Q0C1 308 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TIGD4Q8IY51 512 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 NANOGP1Q8N7R0 232 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 SNX33Q8WV41 574 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 CDADC1Q9BWV3 514 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 RBM24Q9BX46 236 aaKnown RBP15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 WDR76Q9H967 626 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 ASH1LQ9NR48 2969 aaKnown RBP15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 CLEC2DQ9UHP7 191 aa15.17■□□□□ 0.02
CCDC28B-202ENST00000421922 TLN1Q9Y490 2541 aaKnown RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 CCDC160A6NGH7 325 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 J3QRE1 110 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 DHHO43323 396 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 NOL3O60936 208 aaKnown RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 LCKP06239 509 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 AGTR1P30556 359 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 TDGF1P3P51864 188 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 GALEQ14376 348 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 TIGD6Q17RP2 521 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 C10orf128Q5T292 105 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 UBE2UQ5VVX9 321 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 RPTNQ6XPR3 784 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 FAM220AQ7Z4H9 259 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 ABHD12BQ7Z5M8 362 aaPredicted RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 ADGRE4PQ86SQ3 457 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 SATL1Q86VE3 508 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 UBE2J2Q8N2K1 259 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 OR52N1Q8NH53 320 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 FAM57AQ8TBR7 257 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 NMD3Q96D46 503 aaKnown RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 ALKBH3Q96Q83 286 aaPredicted RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 SLX1AQ9BQ83 275 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 MARCH7Q9H992 704 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 ASF1BQ9NVP2 202 aa15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 FOXD3Q9UJU5 478 aaPredicted RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 ING1Q9UK53 422 aaPredicted RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 CAB39Q9Y376 341 aaPredicted RBP15.16■□□□□ 0.02
CCDC28B-202ENST00000421922 IGKV1D-43A0A0B4J1Z2 117 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 A0A1W2PQL4 384 aaPredicted RBP15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 CD8B2A6NJW9 211 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF587BE7ETH6 402 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF593O00488 134 aaPredicted RBP15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 SS18L1O75177 396 aaPredicted RBP15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 INMTO95050 263 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 TFP02787 698 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 HRGP04196 525 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 HOXD4P09016 255 aaPredicted RBP15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 LIMS3P0CW19 117 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 LIMS4P0CW20 117 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 CAPZA2P47755 286 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 RAB39AQ14964 217 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 SPHARQ15513 63 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 SGCAQ16586 387 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 RIPPLY2Q5TAB7 128 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 NSUN5P2Q63ZY6 315 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 SLC18B1Q6NT16 456 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 LRFN4Q6PJG9 635 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 DPY19L4Q7Z388 723 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 FGD2Q7Z6J4 655 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 CDC20BQ86Y33 519 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 ZNF454Q8N9F8 522 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 SLC26A10Q8NG04 563 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 SMAP2Q8WU79 429 aaPredicted RBP15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 THEM6Q8WUY1 208 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 TTTY10Q9BZA0 68 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 LINC00470Q9BZP3 86 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 C12orf49Q9H741 205 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 NDUFA13Q9P0J0 144 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 KCNG2Q9UJ96 466 aa15.15■□□□□ 0.02
CCDC28B-202ENST00000421922 MED12LQ86YW9 2145 aa15.14■□□□□ 0.01
CCDC28B-202ENST00000421922 UPK3AO75631 287 aa15.14■□□□□ 0.01
CCDC28B-202ENST00000421922 MT-ND5P03915 603 aa15.14■□□□□ 0.01
CCDC28B-202ENST00000421922 ADRA2AP08913 450 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms