RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 COPZ1P61923 177 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 HPCAP84074 193 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 SPATA46Q5T0L3 261 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 FAM69AQ5T7M9 428 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 NET1Q7Z628 596 aaPredicted RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 ZNF101Q8IZC7 436 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 RBM15BQ8NDT2 890 aaKnown RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 VPS37AQ8NEZ2 397 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 OR7A2PQ8NGA2 310 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 ZNF417Q8TAU3 575 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 ITLN1Q8WWA0 313 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 TUBGCP3Q96CW5 907 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 ZNF587Q96SQ5 575 aaPredicted RBP7.39□□□□□ -1.23
TRIM39-206ENST00000420746 EMC6Q9BV81 110 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 KRTAP3-2Q9BYR7 98 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 NPFFR1Q9GZQ6 430 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 OR51I1Q9H343 314 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 GSTO2Q9H4Y5 243 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 MAN2C1Q9NTJ4 1040 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 BAIAP2L1Q9UHR4 511 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 SNX24Q9Y343 169 aa7.39□□□□□ -1.23
TRIM39-206ENST00000420746 ZNF726A6NNF4 738 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 FBP2O00757 339 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 TIMM8AO60220 97 aaPredicted RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 JTBO76095 146 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 PF4P02776 101 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 PF4V1P10720 104 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 MAPK1P28482 360 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 SOAT1P35610 550 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 PSMB10P40306 273 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 WNT5AP41221 380 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 ACAA2P42765 397 aaKnown RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 CSNK1A1P48729 337 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 RPL38P63173 70 aaKnown RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 HBA1P69905 142 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 GUCA2AQ02747 115 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 EGR4Q05215 589 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 CALCOCO2Q13137 446 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 UAP1Q16222 522 aaPredicted RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 RFTN2Q52LD8 501 aaPredicted RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 TCTEX1D4Q5JR98 221 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 MRPL2Q5T653 305 aaKnown RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 LIPMQ5VYY2 423 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 NHLRC1Q6VVB1 395 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 KLHL7Q8IXQ5 586 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 C1orf87Q8N0U7 546 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 Q8N2B8 174 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 OR2Z1Q8NG97 314 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 XAGE5Q8WWM1 108 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 NSMAFQ92636 917 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 COQ8BQ96D53 544 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 SLC41A3Q96GZ6 507 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 POM121L2Q96KW2 1035 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 OR2V2Q96R30 315 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 SH3GL3Q99963 347 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 TBCCD1Q9NVR7 557 aa7.38□□□□□ -1.23
TRIM39-206ENST00000420746 LSM4Q9Y4Z0 139 aaKnown RBP7.38□□□□□ -1.23
TRIM39-206ENST00000420746 RNF103-CHMP3A0A140T963 221 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 A0A1B0GVI7 797 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CDHR4A6H8M9 788 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 TMEM114B3SHH9 223 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 MS4A18H0YCH9 400 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CFLARO15519 480 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CRCPO75575 148 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 LYPLA1O75608 230 aaPredicted RBP7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CLIC3O95833 236 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 MMP7P09237 267 aaPredicted RBP7.37□□□□□ -1.23
TRIM39-206ENST00000420746 HLA-DOBP13765 273 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 IL7RP16871 459 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 TUBG1P23258 451 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 STOMP27105 288 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CHATP28329 748 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 MAGEA4P43358 317 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 PPP1CBP62140 327 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 PSG7Q13046 419 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 MS4A18Q3C1V0 323 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CRIP3Q6Q6R5 217 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 LIAT1Q6ZQX7 453 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 Q6ZR03 302 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 SLC16A14Q7RTX9 510 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 IGFN1Q86VF2 1251 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 LCA5Q86VQ0 697 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 HOMEZQ8IX15 550 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 MIER2Q8N344 545 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CADM2Q8N3J6 435 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 SCAIQ8N9R8 606 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 HIPK4Q8NE63 616 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 OR6S1Q8NH40 331 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 FBXO25Q8TCJ0 367 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 TMEM54Q969K7 222 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CCDC126Q96EE4 140 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 TRNT1Q96Q11 434 aaKnown RBP7.37□□□□□ -1.23
TRIM39-206ENST00000420746 CHID1Q9BWS9 393 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 DPY30Q9C005 99 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 FAM234AQ9H0X4 552 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 TUBG2Q9NRH3 451 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 SERTAD4Q9NUC0 356 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 SNX12Q9UMY4 172 aa7.37□□□□□ -1.23
TRIM39-206ENST00000420746 KPTNQ9Y664 436 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms