RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 UBBP0CG47 229 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 PIPP12273 146 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 SNRPBP14678 240 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ALKBH1Q13686 389 aaKnown RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 TRILQ7L0X0 811 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 DEFB108BQ8NET1 73 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ATF6BQ99941 703 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 SLA2Q9H6Q3 261 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 A4GALTQ9NPC4 353 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 SELENOFO60613 162 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 KLKB1P03952 638 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 FAM157BP0CG42 384 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 FOLR1P15328 257 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF77Q15935 545 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 ANKRD16Q6P6B7 361 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 LRRC56Q8IYG6 542 aaPredicted RBP10.31□□□□□ -0.76
PTCH1-205ENST00000418258 FAM71CQ8NEG0 241 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 PPP1R3CQ9UQK1 317 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 NRXN3Q9Y4C0 1643 aa10.31□□□□□ -0.76
PTCH1-205ENST00000418258 OR6C76A6NM76 312 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 ABLIM3O94929 683 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 ACSM1Q08AH1 577 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CLINT1Q14677 625 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 GDF7Q7Z4P5 450 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 DNAJC5GQ8N7S2 189 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 NUDT9Q9BW91 350 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 IDSB3KWA1 339 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 FADS1O60427 444 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 IVDP26440 423 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 RFC3P40938 356 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CSN1S1P47710 185 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 UBA52P62987 128 aaKnown RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 LGALS14Q8TCE9 139 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 PATE1Q8WXA2 126 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CCDC74BQ96LY2 380 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 ARV1Q9H2C2 271 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 TCEAL2Q9H3H9 227 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 RTTNQ86VV8 2226 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 A0A0B4J2A0 478 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 AGAP14A8MT82 685 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 GPRIN2O60269 458 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CD14P08571 375 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 BCL7AQ4VC05 210 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF626Q68DY1 528 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 Q6ZRG5 221 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 LILRA3Q8N6C8 439 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 SLC25A43Q8WUT9 341 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 NMES1Q9C002 83 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 SHPKQ9UHJ6 478 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 IGHV3-15A0A0B4J1V0 119 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 TMEM202A6NGA9 273 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 RPL35P42766 123 aaKnown RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 GIPRP48546 466 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 NOVA1P51513 510 aaKnown RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 ILKQ13418 452 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 POU4F3Q15319 338 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CORO2AQ92828 525 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 SARAFQ96BY9 339 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 COA3Q9Y2R0 106 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 HOXC11O43248 304 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CRYAAP02489 173 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 UBE2KP61086 200 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 EMX1Q04741 257 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 FAM199XQ6PEV8 388 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-205ENST00000418258 NLRC3Q7RTR2 1065 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 BPIFCQ8NFQ6 507 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 MRGPRX1Q96LB2 322 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 FOSL1P15407 271 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 GLRA1P23415 457 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 MAP2K6P52564 334 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 FOXK2Q01167 660 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 YIF1BQ5BJH7 314 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 PAQR9Q6ZVX9 377 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 SSX9Q7RTT3 188 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 OR2T11Q8NH01 316 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 CRYGNQ8WXF5 182 aa10.3□□□□□ -0.76
PTCH1-205ENST00000418258 DBX2Q6ZNG2 339 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 SKA3Q8IX90 412 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 OR51A2Q8NGJ7 313 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 CSF3RQ99062 836 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 SLC29A1Q99808 456 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF436Q9C0F3 470 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-205ENST00000418258 PLEKHF2Q9H8W4 249 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 PTTG3PQ9NZH4 202 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 MTCH1Q9NZJ7 389 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 APC2O95996 2303 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 SEC16AO15027 2179 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 POM121BA6NF01 834 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 TNFRSF10CO14798 259 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 GLAP06280 429 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 QDPRP09417 244 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 NAGAP17050 411 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 PFN3P60673 137 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 ABHD17CQ6PCB6 329 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 ANGPTL5Q86XS5 388 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 ZNF583Q96ND8 569 aa10.29□□□□□ -0.76
PTCH1-205ENST00000418258 STACQ99469 402 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms