RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SCGB2B2Q4G0G5 96 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM35AQ53FP2 167 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC35D3Q5M8T2 416 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ARHGAP40Q5TG30 622 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 REC114Q7Z4M0 266 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF547Q8IVP9 402 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 RAB7BQ96AH8 199 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF681Q96N22 645 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 RNF126Q9BV68 326 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 CHST5Q9GZS9 411 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 CST11Q9H112 138 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLCO5A1Q9H2Y9 848 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF107Q9UII5 783 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC25A13Q9UJS0 675 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 MYOFQ9NZM1 2061 aa7.27□□□□□ -1.24
HMGXB4-202ENST00000418170 METTL21EPA6NDL7 271 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3BA6NDS4 549 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3FA6NER0 549 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 IFITM10A6NMD0 228 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 MBTPS2O43462 519 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 DUSP11O75319 330 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 UPK3AO75631 287 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 RPP14O95059 124 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 CYB5AP00167 134 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 TACSTD2P09758 323 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 NDUFB7P17568 137 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 RPS4Y1P22090 263 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 NME2P22392 152 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 HIST1H1TP22492 207 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ADH6P28332 368 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 GSK3AP49840 483 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 IL13RA1P78552 427 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ELOCQ15369 112 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 TBC1D3GQ6DHY5 549 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 CDPF1Q6NVV7 123 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF585AQ6P3V2 769 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 BTNL8Q6UX41 500 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC39A5Q6ZMH5 540 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 RHOUQ7L0Q8 258 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 OR6K6Q8NGW6 343 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF775Q96BV0 537 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SDF2Q99470 211 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 CDC6Q99741 560 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC6A7Q99884 636 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ATG5Q9H1Y0 275 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 OR52A5Q9H2C5 316 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 GFOD1Q9NXC2 390 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SLC2A8Q9NY64 477 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ADAM18Q9Y3Q7 739 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 GOLGA4Q13439 2230 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 LOC100289279A0A1B0GTE1 492 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 C4orf51C9J302 202 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 PRICKLE3O43900 615 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ADAMTS4O75173 837 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 FGF19O95750 216 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ITGA5P08648 1049 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 OR8G3PP0DMU2 310 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 NID1P14543 1247 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ST6GAL1P15907 406 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 GRPRP30550 384 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 CDX1P47902 265 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 C2orf76Q3KRA6 126 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 NSUN5P2Q63ZY6 315 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF595Q8IYB9 648 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ACOT4Q8N9L9 421 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 TMEM106AQ96A25 262 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 FAM3DQ96BQ1 224 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 MEGF10Q96KG7 1140 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 LINC00615Q96LM1 132 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 IP6K3Q96PC2 410 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 ZNF559Q9BR84 538 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 PCBD2Q9H0N5 130 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 KCNK15Q9H427 330 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 HCSTQ9UBK5 93 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 LSM7Q9UK45 103 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 IER3IP1Q9Y5U9 82 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 A0A1B0GWJ7 208 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 LOC390937A0A1W2PQ73 354 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 DBIP07108 87 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SNRNP70P08621 437 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 AKR1A1P14550 325 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 HIST1H1BP16401 226 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 CSNK1G2P78368 415 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 SSX2Q16385 188 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 FAM220AQ7Z4H9 259 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 FAM24BQ8N5W8 94 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 NPEPL1Q8NDH3 523 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 AKR7LQ8NHP1 331 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 RNASE11Q8TAA1 199 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 NMES1Q9C002 83 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 C6orf106Q9H6K1 298 aaPredicted RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 MSRAQ9UJ68 235 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 FARSAQ9Y285 508 aaKnown RBP7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 LRRK1Q38SD2 2015 aa7.27□□□□□ -1.25
HMGXB4-202ENST00000418170 DOK2O60496 412 aa7.26□□□□□ -1.25
HMGXB4-202ENST00000418170 MED6O75586 246 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms