RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 TFP02787 698 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 CDK1P06493 297 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 DCKP27707 260 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 OPRM1P35372 400 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF84P51523 738 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 MRPS34P82930 218 aaKnown RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 ROR2Q01974 943 aaKnown RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 ST3GAL4Q11206 333 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 PCK2Q16822 640 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 CNEP1R1Q8N9A8 125 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF511Q8NB15 262 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 OR52I1Q8NGK6 324 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 NSMAFQ92636 917 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF837Q96EG3 531 aaPredicted RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 TMEM80Q96HE8 168 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 CNN2Q99439 309 aaKnown RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 MNTQ99583 582 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 RHNO1Q9BSD3 238 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 COPS4Q9BT78 406 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 YIPF3Q9GZM5 350 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 RERGLQ9H628 205 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 MRPL22Q9NWU5 206 aaKnown RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF629Q9UEG4 869 aaPredicted RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 KCNG2Q9UJ96 466 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 DIMT1Q9UNQ2 313 aaKnown RBP12.56□□□□□ -0.4
SF3B1-204ENST00000414963 OSGIN2Q9Y236 505 aa12.56□□□□□ -0.4
SF3B1-204ENST00000414963 COL6A6A6NMZ7 2263 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 MED12LQ86YW9 2145 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 TRGV8A0A0C4DH27 118 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 A0A0G2JNJ9 132 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 TRIM64CA6NLI5 447 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF587BE7ETH6 402 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 KRT33AO76009 404 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 IGHA1P01876 353 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 HTR1AP08908 422 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 NPR2P20594 1047 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 LSM6P62312 80 aaKnown RBP12.55□□□□□ -0.4
SF3B1-204ENST00000414963 SIRPAP78324 504 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 VWA1Q6PCB0 445 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 Q6ZT83 130 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 AHSA2Q719I0 299 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 SLC16A9Q7RTY1 509 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 PRSS48Q7RTY5 328 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.55□□□□□ -0.4
SF3B1-204ENST00000414963 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 OR4F15Q8NGB8 312 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 OR51G2Q8NGK0 314 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 SGCDQ92629 289 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 BOD1Q96IK1 185 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 ALKBH3Q96Q83 286 aaPredicted RBP12.55□□□□□ -0.4
SF3B1-204ENST00000414963 INTS14Q96SY0 518 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 RBM24Q9BX46 236 aaKnown RBP12.55□□□□□ -0.4
SF3B1-204ENST00000414963 CDCA4Q9BXL8 241 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 PIGMQ9H3S5 423 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 SIAEQ9HAT2 523 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 POLE4Q9NR33 117 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 INPP5EQ9NRR6 644 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 TMEM38BQ9NVV0 291 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 ERVK-18Q9QC07 812 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 UPB1Q9UBR1 384 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 Q9UFV3 132 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 PRSS50Q9UI38 385 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 PROCRQ9UNN8 238 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 DOCK7Q96N67 2140 aa12.55□□□□□ -0.4
SF3B1-204ENST00000414963 TVP23AA6NH52 213 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF99A8MXY4 864 aaPredicted RBP12.54□□□□□ -0.4
SF3B1-204ENST00000414963 RGS10O43665 173 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 SELENOFO60613 162 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 MPZL1O95297 269 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 RAB36O95755 333 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 GPANK1O95872 356 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 IGHV3-9P01782 118 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 SCG5P05408 212 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 RPSAP08865 295 aaKnown RBP12.54□□□□□ -0.4
SF3B1-204ENST00000414963 OR2T7P0C7T2 308 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
SF3B1-204ENST00000414963 MPGP29372 298 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ATP6V1E1P36543 226 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 GUCA1AP43080 201 aaPredicted RBP12.54□□□□□ -0.4
SF3B1-204ENST00000414963 SH3BGRP55822 239 aaPredicted RBP12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ACTC1P68032 377 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ACTA1P68133 377 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 FAPQ12884 760 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 MRPL49Q13405 166 aaKnown RBP12.54□□□□□ -0.4
SF3B1-204ENST00000414963 IRF3Q14653 427 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 FAM27BQ5VT28 67 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ZNF773Q6PK81 442 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 LYPD4Q6UWN0 246 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ZGRF1Q86YA3 2104 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 EGFL6Q8IUX8 553 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 UBE2J2Q8N2K1 259 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 STX19Q8N4C7 294 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 ACBD7Q8N6N7 88 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 TSPAN14Q8NG11 270 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 OR2T27Q8NH04 317 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 RND1Q92730 232 aa12.54□□□□□ -0.4
SF3B1-204ENST00000414963 NABP1Q96AH0 204 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms