RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 ST3GAL3Q11203 375 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 SGCAQ16586 387 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 ALG10Q5BKT4 473 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 PABPC1L2AQ5JQF8 200 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 C10orf128Q5T292 105 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 DPPA2Q7Z7J5 298 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 OR1J2Q8NGS2 313 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 AKR7LQ8NHP1 331 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 SYNPRQ8TBG9 265 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 SNX33Q8WV41 574 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 LIPHQ8WWY8 451 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 NABP1Q96AH0 204 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 KCNN2Q9H2S1 579 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 C1orf198Q9H425 327 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 TMEFF2Q9UIK5 374 aaPredicted RBP13.3□□□□□ -0.28
ACTB-202ENST00000414620 UGT2A1Q9Y4X1 527 aa13.3□□□□□ -0.28
ACTB-202ENST00000414620 TRAV27A0A087WT01 109 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 CENPBD1B2RD01 187 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 FAM157AC9JC47 383 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 SNAP29O95721 258 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 PTHP01270 115 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 IGF2P01344 180 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 TSPAN19P0C672 248 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 MAKP20794 623 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 SRP14P37108 136 aaKnown RBP13.29□□□□□ -0.28
ACTB-202ENST00000414620 ZNF133P52736 654 aaPredicted RBP13.29□□□□□ -0.28
ACTB-202ENST00000414620 UCP2P55851 309 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 SELENOVP59797 346 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 CTXN1P60606 82 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 ERVK-25P63136 954 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 SELENOWP63302 87 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 NRN1LQ496H8 165 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 SPATA46Q5T0L3 261 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 NRMQ8IXM6 262 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 CPEB3Q8NE35 698 aaKnown RBP13.29□□□□□ -0.28
ACTB-202ENST00000414620 OR1J1Q8NGS3 322 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 C11orf40Q8WZ69 217 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 NMD3Q96D46 503 aaKnown RBP13.29□□□□□ -0.28
ACTB-202ENST00000414620 BPIFA2Q96DR5 249 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 C19orf24Q9BVV8 132 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 LRMDAQ9H2I8 198 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 TXNIPQ9H3M7 391 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 HINT3Q9NQE9 182 aaKnown RBP13.29□□□□□ -0.28
ACTB-202ENST00000414620 ZNF446Q9NWS9 450 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 TREM2Q9NZC2 230 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 STX18Q9P2W9 335 aaKnown RBP13.29□□□□□ -0.28
ACTB-202ENST00000414620 HIF3AQ9Y2N7 669 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 SNX13Q9Y5W8 968 aa13.29□□□□□ -0.28
ACTB-202ENST00000414620 IGLV3-9A0A075B6K5 115 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 C17orf100A8MU93 164 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 H7C1C5 153 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 MGRN1O60291 552 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 ZNF682O95780 498 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 ZNF250P15622 560 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 IFNA8P32881 189 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 RAD52P43351 418 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 DVL1P1P54792 670 aaPredicted RBP13.28□□□□□ -0.28
ACTB-202ENST00000414620 LCN6P62502 163 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 CCL8P80075 99 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 MRPS34P82930 218 aaKnown RBP13.28□□□□□ -0.28
ACTB-202ENST00000414620 TSTQ16762 297 aaKnown RBP13.28□□□□□ -0.28
ACTB-202ENST00000414620 AVPI1Q5T686 147 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 TMEM154Q6P9G4 183 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 SLC25A47Q6Q0C1 308 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 OR13C2Q8NGS9 318 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 OR51A7Q8NH64 312 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 ZNF519Q8TB69 540 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 LZICQ8WZA0 190 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 FNDC11Q9BVV2 318 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 BCL2L14Q9BZR8 327 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 SIAEQ9HAT2 523 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 MAN2C1Q9NTJ4 1040 aa13.28□□□□□ -0.28
ACTB-202ENST00000414620 SVEP1Q4LDE5 3571 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 A0A1W2PPL8 197 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 CXCR6O00574 342 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 GSTA4O15217 222 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 TPD52L2O43399 206 aaKnown RBP13.27□□□□□ -0.29
ACTB-202ENST00000414620 RP2O75695 350 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 IFNW1P05000 195 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 DRD4P21917 467 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 STOMP27105 288 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 THBS2P35442 1172 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 WNT5AP41221 380 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 RPL27P61353 136 aaKnown RBP13.27□□□□□ -0.29
ACTB-202ENST00000414620 LIPEQ05469 1076 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 GLCCI1Q86VQ1 547 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 SLC15A3Q8IY34 581 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 ZNF101Q8IZC7 436 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 OFCC1Q8IZS5 231 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 LRRC75AQ8NAA5 344 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 C1orf159Q96HA4 380 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 ALG12Q9BV10 488 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 ZNF416Q9BWM5 594 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 SLCO1C1Q9NYB5 712 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 GPR160Q9UJ42 338 aa13.27□□□□□ -0.29
ACTB-202ENST00000414620 MXRA5Q9NR99 2828 aa13.26□□□□□ -0.29
ACTB-202ENST00000414620 C5orf49A4QMS7 147 aa13.26□□□□□ -0.29
ACTB-202ENST00000414620 NPIPB13A6NJU9 1138 aa13.26□□□□□ -0.29
ACTB-202ENST00000414620 EFCAB9A8MZ26 197 aa13.26□□□□□ -0.29
ACTB-202ENST00000414620 B4DSR2 109 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms