RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ZNF503-AS2A6NEH8 195 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 HMGN1P05114 100 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 SCG5P05408 212 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 PEX19P40855 299 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 SLX4IPQ5VYV7 408 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 C17orf78Q8N4C9 275 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 SLC22A24Q8N4F4 322 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 HSD17B8Q92506 261 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 NABP1Q96AH0 204 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 DACH2Q96NX9 599 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 HCAR1Q9BXC0 346 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 SLC25A15Q9Y619 301 aa26.76■■□□□ 1.87
CSNK1E-206ENST00000413574 HECTD1Q9ULT8 2610 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 IGLV1-36A0A0B4J1U3 117 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 ZNF3P17036 446 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 PPA1Q15181 289 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 SGCAQ16586 387 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 SKA3Q8IX90 412 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 ZNRF4Q8WWF5 429 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 OTULINQ96BN8 352 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 C1QTNF6Q9BXI9 259 aa26.75■■□□□ 1.87
CSNK1E-206ENST00000413574 KHDRBS3O75525 346 aaKnown RBP26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 GYPBP06028 91 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 CLUP10909 449 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 COX6B1P14854 86 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 HOXC12P31275 282 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 SNAPC1Q16533 368 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 P2RY8Q86VZ1 359 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 LRRC18Q8N456 261 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 OR51L1Q8NGJ5 315 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 NRG4Q8WWG1 115 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 MUCL1Q96DR8 90 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 USB1Q9BQ65 265 aaKnown RBP26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 ZNF224Q9NZL3 707 aa26.74■■□□□ 1.87
CSNK1E-206ENST00000413574 DLGAP1O14490 977 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 MPZL1O95297 269 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 ATP6V1G2O95670 118 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 PATE4P0C8F1 98 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 EPXP11678 715 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 CRABP1P29762 137 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 PYCR1P32322 319 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 CAPZA2P47755 286 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 CENPAP49450 140 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 UBE2NP61088 152 aaKnown RBP26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 MRPS34P82930 218 aaKnown RBP26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 C12orf73Q69YU5 71 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 SEZ6L2Q6UXD5 910 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 FGFBP3Q8TAT2 258 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 TEX12Q9BXU0 123 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 GRIP2Q9C0E4 1043 aa26.73■■□□□ 1.87
CSNK1E-206ENST00000413574 HLA-HP01893 362 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 OR8G3PP0DMU2 310 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 RIPK1Q13546 671 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 FOXL2NBQ6ZUU3 175 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 ZBTB46Q86UZ6 589 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 PLEKHA8Q96JA3 519 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 SLC38A2Q96QD8 506 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 NMNAT2Q9BZQ4 307 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 NPAP1Q9NZP6 1156 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 FKBP7Q9Y680 259 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 PRKYO43930 277 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 PIGFQ07326 219 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 PLBD1Q6P4A8 553 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 DNM1P34Q6PK57 102 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 UGT2A3Q6UWM9 527 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 FAM222BQ8WU58 562 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 PTP4A1Q93096 173 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 SIAEQ9HAT2 523 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 HINT3Q9NQE9 182 aaKnown RBP26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 AMDHD2Q9Y303 409 aa26.72■■□□□ 1.87
CSNK1E-206ENST00000413574 CENPEQ02224 2701 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 ARPC4-TTLL3A0A0A6YYG9 625 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 LAP3P28838 519 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 GLB1L2Q8IW92 636 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 NOX3Q9HBY0 568 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 EMC7Q9NPA0 242 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 POLE4Q9NR33 117 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 ZNF226Q9NYT6 803 aa26.71■■□□□ 1.87
CSNK1E-206ENST00000413574 SPI1P17947 270 aa26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 NPR2P20594 1047 aa26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 ZSCAN2Q7Z7L9 614 aaPredicted RBP26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 CPOQ8IVL8 374 aa26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 TCEANCQ8N8B7 351 aa26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 PROKR2Q8NFJ6 384 aa26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 RACGAP1Q9H0H5 632 aa26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 SMPD3Q9NY59 655 aaPredicted RBP26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 HRNRQ86YZ3 2850 aaPredicted RBP26.7■■□□□ 1.86
CSNK1E-206ENST00000413574 E9PQ18 207 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 CASKO14936 926 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 SIAH2O43255 324 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 FARS2O95363 451 aaKnown RBP26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 CD79AP11912 226 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 SLC25A1P53007 311 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 MEP1BQ16820 701 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 ZNF787Q6DD87 383 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 LYPD4Q6UWN0 246 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 PACRGLQ8N7B6 248 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 BBS1Q8NFJ9 593 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 OR2T4Q8NH00 348 aa26.69■■□□□ 1.86
CSNK1E-206ENST00000413574 B3GNT2Q9NY97 397 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms