RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 DCTN3O75935 186 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 FARS2O95363 451 aaKnown RBP16.39■□□□□ 0.21
SF3A1-202ENST00000411423 GLRXP35754 106 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 ZBED5Q49AG3 693 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 MESTQ5EB52 335 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 FGD3Q5JSP0 725 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 SAMD4BQ5PRF9 694 aaKnown RBP16.39■□□□□ 0.21
SF3A1-202ENST00000411423 FOXL2NBQ6ZUU3 175 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 Q96M85 177 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 TPK1Q9H3S4 243 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 SIAEQ9HAT2 523 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 IL20RAQ9UHF4 553 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 MAGEL2Q9UJ55 1249 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 SIGLEC7Q9Y286 467 aa16.39■□□□□ 0.21
SF3A1-202ENST00000411423 CD5LO43866 347 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 ADRA2AP08913 450 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 FAM157BP0CG42 384 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 SLC25A16P16260 332 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 ZNF32P17041 273 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 APEX1P27695 318 aaKnown RBP16.38■□□□□ 0.21
SF3A1-202ENST00000411423 LOXL1Q08397 574 aaPredicted RBP16.38■□□□□ 0.21
SF3A1-202ENST00000411423 MAD2L1BPQ15013 274 aaPredicted RBP16.38■□□□□ 0.21
SF3A1-202ENST00000411423 SGCAQ16586 387 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 SLC36A2Q495M3 483 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 PABPC1L2AQ5JQF8 200 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 TMEM53Q6P2H8 277 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 ARIH2OSQ8N7S6 290 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 AKR7LQ8NHP1 331 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 RASD2Q96D21 266 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 FOXN4Q96NZ1 517 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 OR51B6Q9H340 312 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 STX18Q9P2W9 335 aaKnown RBP16.38■□□□□ 0.21
SF3A1-202ENST00000411423 ADAM21Q9UKJ8 722 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 FBXL3Q9UKT7 428 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 FKBP7Q9Y680 259 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 CHD3Q12873 2000 aaKnown RBP16.38■□□□□ 0.21
SF3A1-202ENST00000411423 DNHD1Q96M86 4753 aa16.38■□□□□ 0.21
SF3A1-202ENST00000411423 CD14P08571 375 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 ATP6V1B2P21281 511 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 LAP3P28838 519 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 ALDH3B1P43353 468 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 PDLIM4P50479 330 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 ENDOGQ14249 297 aaKnown RBP16.37■□□□□ 0.21
SF3A1-202ENST00000411423 KRT72Q14CN4 511 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 TMEM249Q2WGJ8 235 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 ANKDD1AQ495B1 522 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 TMEM255AQ5JRV8 349 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 THEM4Q5T1C6 240 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
SF3A1-202ENST00000411423 OTPQ5XKR4 325 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 UGT2A3Q6UWM9 527 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 NSMCE2Q96MF7 247 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 SLC7A8Q9UHI5 535 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 TMEM5Q9Y2B1 443 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 FAM32AQ9Y421 112 aaKnown RBP16.37■□□□□ 0.21
SF3A1-202ENST00000411423 CUBNO60494 3623 aa16.37■□□□□ 0.21
SF3A1-202ENST00000411423 ABCA1O95477 2261 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 LOC100509620A0A075B734 347 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 IGHV4-61A0A0C4DH41 118 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 TEX13CA0A0J9YWL9 993 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 SLC22A23A1A5C7 686 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 LYNX1G3V0Z9 82 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 DYNC1I1O14576 645 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 CLPTM1O96005 669 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 CSF3P09919 207 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 T-ENOLP0DO92 83 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 LYNX1P0DP58 116 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 RPL4P36578 427 aaKnown RBP16.36■□□□□ 0.21
SF3A1-202ENST00000411423 NR4A2P43354 598 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 PSG4Q00888 419 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 GALK2Q01415 458 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 DBPQ10586 325 aaPredicted RBP16.36■□□□□ 0.21
SF3A1-202ENST00000411423 CARTPTQ16568 116 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 FAM27BQ5VT28 67 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 FAM205BPQ63HN1 556 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 C16orf89Q6UX73 402 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 RINLQ6ZS11 566 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 RRM2BQ7LG56 351 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 DPPA2Q7Z7J5 298 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 ZER1Q7Z7L7 766 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 RSRC1Q96IZ7 334 aaKnown RBP16.36■□□□□ 0.21
SF3A1-202ENST00000411423 RBP7Q96R05 134 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 WNT5BQ9H1J7 359 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 DYNLRB1Q9NP97 96 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 NRIP3Q9NQ35 241 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 HIVEP2P31629 2446 aa16.36■□□□□ 0.21
SF3A1-202ENST00000411423 A0A1W2PPL8 197 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 A6NIZ1 184 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 ENTPD5O75356 428 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 GMNNO75496 209 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 STAMBPO95630 424 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 SNAP29O95721 258 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 IGHV4-31P0DP07 118 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 WNT5AP41221 380 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 EVX1P49640 407 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 RAP1BP61224 184 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 RAP1AP62834 184 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 MXRA7P84157 204 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 SPIBQ01892 262 aa16.35■□□□□ 0.21
SF3A1-202ENST00000411423 ALKBH6Q3KRA9 238 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms