RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 OPN3Q9H1Y3 402 aaPredicted RBP3.98□□□□□ -1.77
LSM5-206ENST00000409987 HRASLS2Q9NWW9 162 aa3.98□□□□□ -1.77
LSM5-206ENST00000409987 MS4A12Q9NXJ0 267 aa3.98□□□□□ -1.77
LSM5-206ENST00000409987 EURLQ9NYK6 297 aa3.98□□□□□ -1.77
LSM5-206ENST00000409987 STMN3Q9NZ72 180 aa3.98□□□□□ -1.77
LSM5-206ENST00000409987 CCDC59Q9P031 241 aaKnown RBP3.98□□□□□ -1.77
LSM5-206ENST00000409987 ARMCX1Q9P291 453 aa3.98□□□□□ -1.77
LSM5-206ENST00000409987 YARS2Q9Y2Z4 477 aaKnown RBP3.98□□□□□ -1.77
LSM5-206ENST00000409987 POLR1AO95602 1720 aaPredicted RBP3.98□□□□□ -1.77
LSM5-206ENST00000409987 ADGRA3Q8IWK6 1321 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 BLMP54132 1417 aaPredicted RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 MIA2Q96PC5 1412 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 FAM135AQ9P2D6 1515 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 ABCA6Q8N139 1617 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 SLC22A20A6NK97 555 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 ZNF705EA8MWA4 302 aaPredicted RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 RSPH10B2B2RC85 870 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 LOC110117498-PIK3R3F6TDL0 507 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 CDC7O00311 574 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 DCTN6O00399 190 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 PHF1O43189 567 aaPredicted RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 EEDO75530 441 aaKnown RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 KLHL2O95198 593 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 LALBAP00709 142 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 KLK1P06870 262 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 RSPH10BP0C881 870 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 BGNP21810 368 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 HMGCLP35914 325 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 NBL1P41271 181 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 ALDH3B2P48448 385 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 SSR4P51571 173 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 IRX3P78415 501 aaPredicted RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 ADARB1P78563 741 aaKnown RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 CHRNB3Q05901 458 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 SERTAD2Q14140 314 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 TRAM2Q15035 370 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 LTB4RQ15722 352 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 CNPY1Q3B7I2 92 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 GPRC6AQ5T6X5 926 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 CMC1Q7Z7K0 106 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 GTSCR1Q86UQ5 136 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 ZBED8Q8IZ13 594 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 SYS1Q8N2H4 156 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 DNAAF3Q8N9W5 541 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 SPATA3Q8NHX4 192 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 NEIL2Q969S2 332 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 CPB2Q96IY4 423 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 PSMB7Q99436 277 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 MRPL45Q9BRJ2 306 aaKnown RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 ZBP1Q9H171 429 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 CWH43Q9H720 699 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 BEX1Q9HBH7 125 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 CD209Q9NNX6 404 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 DHRS4-AS1Q9P1J3 65 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 SUPT6HQ7KZ85 1726 aaKnown RBP3.97□□□□□ -1.77
LSM5-206ENST00000409987 NWD1Q149M9 1564 aa3.97□□□□□ -1.77
LSM5-206ENST00000409987 COL16A1Q07092 1604 aaPredicted RBP3.96□□□□□ -1.78
LSM5-206ENST00000409987 A0A1W2PQ72 361 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 A0A1W2PRF3 423 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 A0A1W2PRM7 423 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 FAM231BA6NCW3 169 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 SCAMP2O15127 329 aaKnown RBP3.96□□□□□ -1.78
LSM5-206ENST00000409987 XRCC2O43543 280 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 GPX5O75715 221 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 CLIC3O95833 236 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 CST4P01036 141 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 IGHV2-5P01817 119 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 RPN2P04844 631 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 CT45A10P0DMU9 189 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 GSSP48637 474 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 ARHGDIBP52566 201 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 ATP6V0D1P61421 351 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 SLC10A7Q0GE19 358 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 CCDC173Q0VFZ6 552 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 GABRA6Q16445 453 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 PAN3Q58A45 887 aaKnown RBP3.96□□□□□ -1.78
LSM5-206ENST00000409987 TPRG1LQ5T0D9 272 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 ANKRD26P1Q6NSI1 321 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 TRIM40Q6P9F5 258 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 GDPD3Q7L5L3 318 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 OR2W3Q7Z3T1 314 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 PLA2G4DQ86XP0 818 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 PDIK1LQ8N165 341 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 SLC22A18ASQ8N1D0 253 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 OR2G2Q8NGZ5 317 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 OR5B3Q8NH48 314 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 TNFRSF14Q92956 283 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 PSMG2Q969U7 264 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 CMTM7Q96FZ5 175 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 PAGE5Q96GU1 130 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 ANKHQ9HCJ1 492 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 GIN1Q9NXP7 522 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 QPCTLQ9NXS2 382 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 SPRR3Q9UBC9 169 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 UBQLN1Q9UMX0 589 aaKnown RBP3.96□□□□□ -1.78
LSM5-206ENST00000409987 RCL1Q9Y2P8 373 aaKnown RBP3.96□□□□□ -1.78
LSM5-206ENST00000409987 PLLPQ9Y342 182 aa3.96□□□□□ -1.78
LSM5-206ENST00000409987 NLRP1Q9C000 1473 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms