RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZBTB46Q86UZ6 589 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 GID4Q8IVV7 300 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 DMRTC2Q8IXT2 367 aaPredicted RBP14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 ENTHD1Q8IYW4 607 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 ZNF610Q8N9Z0 462 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 PROKR2Q8NFJ6 384 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 RHOXF1Q8NHV9 184 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 RFKQ969G6 155 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 Q96MT0 163 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 RBM24Q9BX46 236 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 OPN3Q9H1Y3 402 aaPredicted RBP14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 RERGLQ9H628 205 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 SRA1Q9HD15 236 aaKnown RBP14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 RASSF1Q9NS23 344 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 CLN6Q9NWW5 311 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 JKAMPQ9P055 326 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 MOKQ9UQ07 419 aa14.54□□□□□ -0.08
TSPAN4-208ENST00000409531 HCFC1P51610 2035 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 FAM183AA6NL82 134 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 A8MXE2 369 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 M0R129 80 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 GNAO1P09471 354 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 CTLA4P16410 223 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 SPI1P17947 270 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 GLO1Q04760 184 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 OCLNQ16625 522 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 CEACAM16Q2WEN9 425 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 SLC35D3Q5M8T2 416 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 THAP5Q7Z6K1 395 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 OR6V1Q8N148 313 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 OR9Q1Q8NGQ5 310 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 RNASE6Q93091 150 aaKnown RBP14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 PTP4A1Q93096 173 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 SLC24A3Q9HC58 644 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 ELOVL5Q9NYP7 299 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 ZNF226Q9NYT6 803 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 TAS2R16Q9NYV7 291 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 B9D1Q9UPM9 204 aa14.53□□□□□ -0.08
TSPAN4-208ENST00000409531 ITPR2Q14571 2701 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 SLC22A31A6NKX4 558 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 ZNF99A8MXY4 864 aaPredicted RBP14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 PRF1P14222 555 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 GABRB1P18505 474 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 MYF6P23409 242 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 PEX19P40855 299 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 ISL1P61371 349 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 RPS7P62081 194 aaKnown RBP14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 TEKQ02763 1124 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 MAD2L1BPQ15013 274 aaPredicted RBP14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 KLHL12Q53G59 568 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 LCN1P1Q5VSP4 162 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 AADACL4Q5VUY2 407 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 LUZP2Q86TE4 346 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 GLB1L2Q8IW92 636 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 ZNF295-AS1Q8N0V1 137 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 GABRG1Q8N1C3 465 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 NSMAFQ92636 917 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 TSSK2Q96PF2 358 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 OR51V1Q9H2C8 321 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 MED20Q9H944 212 aa14.52□□□□□ -0.08
TSPAN4-208ENST00000409531 IGLV1-36A0A0B4J1U3 117 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 DENRO43583 198 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 GLCEO94923 617 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 NPR2P20594 1047 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 COX5AP20674 150 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 LAP3P28838 519 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 TMED1Q13445 227 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 APOFQ13790 326 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 NRN1LQ496H8 165 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 KRT80Q6KB66 452 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 MEPCEQ7L2J0 689 aaKnown RBP14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 LINGO2Q7L985 606 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 OR6K6Q8NGW6 343 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 UBE2FQ969M7 185 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 ZNF582Q96NG8 517 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 FOXB1Q99853 325 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 HCAR1Q9BXC0 346 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 HDHD5Q9BXW7 423 aa14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.51□□□□□ -0.093e-6■■■■■ 26.9
TSPAN4-208ENST00000409531 COA3Q9Y2R0 106 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-208ENST00000409531 IGKV1D-43A0A0B4J1Z2 117 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 A0A1W2PPL8 197 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 CIB4A0PJX0 185 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 SH3D21A4FU49 640 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 DCTN6O00399 190 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 FARS2O95363 451 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 HLA-DQA2P01906 255 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 GYPBP06028 91 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 ITGA5P08648 1049 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 CLUP10909 449 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 SLC2A5P22732 501 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 IGHV1-2P23083 117 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 FMO3P31513 532 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 PYCR1P32322 319 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 CDH11P55287 796 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 MRPS34P82930 218 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 HSF2Q03933 536 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 MED21Q13503 144 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 ETFDHQ16134 617 aa14.5□□□□□ -0.09
TSPAN4-208ENST00000409531 OR7E24Q6IFN5 339 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms