RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CPEB3Q8NE35 698 aaKnown RBP16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 BEX2Q9BXY8 128 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 SIAEQ9HAT2 523 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 SMURF2Q9HAU4 748 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 CDH20Q9HBT6 801 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 STX18Q9P2W9 335 aaKnown RBP16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 A0A087WUU8 490 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 CLPTM1O96005 669 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 HPXP02790 462 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 FAM157CP0CG43 387 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 NAT2P11245 290 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 APEX1P27695 318 aaKnown RBP16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 CTXN1P60606 82 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 RPL27P61353 136 aaKnown RBP16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 TRIP10Q15642 601 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 ALKBH6Q3KRA9 238 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 ELFN2Q5R3F8 820 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 FAM166AQ6J272 317 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 RGS7BPQ6MZT1 257 aaPredicted RBP16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 PODNL1Q6PEZ8 512 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 SLC25A47Q6Q0C1 308 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 HACD2Q6Y1H2 254 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 CXXC5Q7LFL8 322 aaKnown RBP16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 OR13C2Q8NGS9 318 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 TSPAN32Q96QS1 320 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 MS4A5Q9H3V2 200 aa16.54■□□□□ 0.24
SMARCB1-204ENST00000407422 IQCMA0A1B0GVH7 501 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 A0A1W2PPW3 197 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 HTR3EA5X5Y0 456 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 EFCAB9A8MZ26 197 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 SNAP29O95721 258 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 IFNA2P01563 188 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 IGHMP01871 453 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 TACSTD2P09758 323 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 PLP2Q04941 152 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 SGCAQ16586 387 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 TBC1D28Q2M2D7 210 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 PABPC1L2AQ5JQF8 200 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF730Q6ZMV8 503 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 IL17RELQ6ZVW7 336 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 OAFQ86UD1 273 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 ACOT11Q8WXI4 607 aaPredicted RBP16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 FAM162AQ96A26 154 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 SNX18Q96RF0 628 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 KCTD14Q9BQ13 255 aaPredicted RBP16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 C1orf198Q9H425 327 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 ABCD2Q9UBJ2 740 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 KCNS2Q9ULS6 477 aa16.53■□□□□ 0.24
SMARCB1-204ENST00000407422 CDC42EP2O14613 210 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 MGRN1O60291 552 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 TGFAP01135 160 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 LCKP06239 509 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF32P17041 273 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 COL8A2P25067 703 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 GPR4P46093 362 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 UCP2P55851 309 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 PSME3P61289 254 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 HSF2Q03933 536 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 TAF11Q15544 211 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF519Q8TB69 540 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 ALG12Q9BV10 488 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 FAM107BQ9H098 131 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 SHARPINQ9H0F6 387 aa16.52■□□□□ 0.24
SMARCB1-204ENST00000407422 SLC22A23A1A5C7 686 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 NCR1O76036 304 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 PTHP01270 115 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 CHN2P52757 468 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 ERVK-25P63136 954 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 THEM4Q5T1C6 240 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 MBOAT2Q6ZWT7 520 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 RNF113BQ8IZP6 322 aaKnown RBP16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 ICA1LQ8NDH6 482 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 OR1J2Q8NGS2 313 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 AKR7LQ8NHP1 331 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 KCNN2Q9H2S1 579 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 NMNAT1Q9HAN9 279 aaPredicted RBP16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 CCNB1IP1Q9NPC3 277 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 TAAR3PQ9P1P4 343 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 EGFL7Q9UHF1 273 aa16.52■□□□□ 0.23
SMARCB1-204ENST00000407422 ZNF250P15622 560 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 ZNF26P17031 533 aaPredicted RBP16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 CCNOP22674 350 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 STOMP27105 288 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 APLNRP35414 380 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 NKPD1Q17RQ9 610 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM120AOSQ5T036 256 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 FAM27BQ5VT28 67 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 SYNPRQ8TBG9 265 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 CMTM5Q96DZ9 223 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 RBP7Q96R05 134 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 LRMDAQ9H2I8 198 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 LPAR3Q9UBY5 353 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 ADAM18Q9Y3Q7 739 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 ENPP4Q9Y6X5 453 aa16.51■□□□□ 0.23
SMARCB1-204ENST00000407422 IGLV3-9A0A075B6K5 115 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 H7C1C5 153 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 NR2C1P13056 603 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 LAP3P28838 519 aa16.5■□□□□ 0.23
SMARCB1-204ENST00000407422 RAD52P43351 418 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms