RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 NMNAT2Q9BZQ4 307 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 GRIP2Q9C0E4 1043 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 SRA1Q9HD15 236 aaKnown RBP25.68■■□□□ 1.7
USP42-202ENST00000404008 TVP23BQ9NYZ1 205 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 B9D1Q9UPM9 204 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 AMDHD2Q9Y303 409 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 SLC25A15Q9Y619 301 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 FKBP7Q9Y680 259 aa25.68■■□□□ 1.7
USP42-202ENST00000404008 ARPC4-TTLL3A0A0A6YYG9 625 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 ATP6V1G2O95670 118 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 SNAP29O95721 258 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 HOXB1P14653 301 aaPredicted RBP25.67■■□□□ 1.7
USP42-202ENST00000404008 PPA1Q15181 289 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 C1QTNF12Q5T7M4 302 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 FAM222BQ8WU58 562 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 MUCL1Q96DR8 90 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 PRRG3Q9BZD7 231 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 RACGAP1Q9H0H5 632 aa25.67■■□□□ 1.7
USP42-202ENST00000404008 COA3Q9Y2R0 106 aaPredicted RBP25.67■■□□□ 1.7
USP42-202ENST00000404008 A0A1W2PPL8 197 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 A0A1W2PR80 420 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 E9PQ18 207 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 DLGAP1O14490 977 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 OR8G3PP0DMU2 310 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 EPXP11678 715 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 COX6B1P14854 86 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 NPR2P20594 1047 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 SLC25A1P53007 311 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 UBE2NP61088 152 aaKnown RBP25.66■■□□□ 1.7
USP42-202ENST00000404008 SNAPC1Q16533 368 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 SEZ6L2Q6UXD5 910 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 SSX8Q7RTT4 187 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 GLB1L2Q8IW92 636 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 PLEKHA8Q96JA3 519 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 RDH12Q96NR8 316 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 SEC61A2Q9H9S3 476 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 SIAEQ9HAT2 523 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 OBP2BQ9NPH6 170 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 SMPD3Q9NY59 655 aaPredicted RBP25.66■■□□□ 1.7
USP42-202ENST00000404008 ZNF226Q9NYT6 803 aa25.66■■□□□ 1.7
USP42-202ENST00000404008 BAHCC1Q9P281 2608 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 FAM183AA6NL82 134 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 SKA3Q8IX90 412 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 CCDC36Q8IYA8 594 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 OR9Q1Q8NGQ5 310 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 OR2T4Q8NH00 348 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 NRG4Q8WWG1 115 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 FOXN4Q96NZ1 517 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 SH3GL3Q99963 347 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 ZNF224Q9NZL3 707 aa25.65■■□□□ 1.7
USP42-202ENST00000404008 LAP3P28838 519 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 SGCAQ16586 387 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 WFDC8Q8IUA0 241 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 HRASLS5Q96KN8 279 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 HCAR1Q9BXC0 346 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 MED20Q9H944 212 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 POLE4Q9NR33 117 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 KCNN3Q9UGI6 736 aa25.64■■□□□ 1.69
USP42-202ENST00000404008 PRR14LQ5THK1 2151 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 CELSR2Q9HCU4 2923 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 ZNF503-AS2A6NEH8 195 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 PRKYO43930 277 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 FARS2O95363 451 aaKnown RBP25.63■■□□□ 1.69
USP42-202ENST00000404008 PAICSP22234 425 aaKnown RBP25.63■■□□□ 1.69
USP42-202ENST00000404008 GUCA1AP43080 201 aaPredicted RBP25.63■■□□□ 1.69
USP42-202ENST00000404008 TUBA1BP68363 451 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 TUBA4AP68366 448 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 FAM27BQ5VT28 67 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 TUBA1AQ71U36 451 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 PTP4A1Q93096 173 aa25.63■■□□□ 1.69
USP42-202ENST00000404008 HINT3Q9NQE9 182 aaKnown RBP25.63■■□□□ 1.69
USP42-202ENST00000404008 PRR23D1E9PI22 279 aaPredicted RBP25.62■■□□□ 1.69
USP42-202ENST00000404008 M0R129 80 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 GPANK1O95872 356 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 WNT11O96014 354 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 SCG5P05408 212 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 GYPBP06028 91 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 PRR23D2P0DMB1 279 aaPredicted RBP25.62■■□□□ 1.69
USP42-202ENST00000404008 GAAP10253 952 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 CLUP10909 449 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 SPI1P17947 270 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 MSR1P21757 451 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 CRYGSP22914 178 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 PYCR1P32322 319 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 EFNB1P98172 346 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 GLO1Q04760 184 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 ALKBH2Q6NS38 261 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 PLBD1Q6P4A8 553 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 CPOQ8IVL8 374 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 LRRC18Q8N456 261 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 PROKR2Q8NFJ6 384 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 ZNRF4Q8WWF5 429 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 OTULINQ96BN8 352 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 B3GNT2Q9NY97 397 aa25.62■■□□□ 1.69
USP42-202ENST00000404008 FAM171A2A8MVW0 826 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 HLA-HP01893 362 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 GGT2P36268 569 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 CAPZA2P47755 286 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 CENPAP49450 140 aa25.61■■□□□ 1.69
USP42-202ENST00000404008 NANOS1Q8WY41 292 aaKnown RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms