RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ABHD4Q8TB40 342 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 NSMAFQ92636 917 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 SLC25A46Q96AG3 418 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 SCMH1Q96GD3 660 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 TRBV2A0A0J9YWF9 115 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 TACSTD2P09758 323 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 CARD18P57730 90 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 SLC17A1Q14916 467 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 HIST3H3Q16695 136 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF829Q3KNS6 432 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-205ENST00000401607 YIPF7Q8N8F6 280 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 FDCSPQ8NFU4 85 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 OR13C5Q8NGS8 318 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 NEIL3Q8TAT5 605 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 HSD17B8Q92506 261 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 C6orf62Q9GZU0 229 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-205ENST00000401607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.81■■□□□ 1.245e-12■■■■□ 21.5
CPNE1-205ENST00000401607 TPK1Q9H3S4 243 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 PLGRKTQ9HBL7 147 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 SLCO1C1Q9NYB5 712 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 IKZF2Q9UKS7 526 aa22.81■■□□□ 1.24
CPNE1-205ENST00000401607 FAM186AA6NE01 2351 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF726A6NNF4 738 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF891A8MT65 544 aaPredicted RBP22.8■■□□□ 1.24
CPNE1-205ENST00000401607 KLRC4-KLRK1H3BQV0 150 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 LINC01387J3KSC0 135 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 CXCL13O43927 109 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 RORCP51449 518 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 PLGLB1Q02325 96 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 HYAL4Q2M3T9 481 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 SLC18B1Q6NT16 456 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 OR10D3Q8NH80 312 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF385AQ96PM9 386 aaKnown RBP22.8■■□□□ 1.24
CPNE1-205ENST00000401607 OR8B4Q96RC9 309 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 KCNN2Q9H2S1 579 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 KLHL9Q9P2J3 617 aa22.8■■□□□ 1.24
CPNE1-205ENST00000401607 RPP14O95059 124 aaKnown RBP22.79■■□□□ 1.24
CPNE1-205ENST00000401607 BMP4P12644 408 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 PCK2Q16822 640 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 SLC25A47Q6Q0C1 308 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 GLB1L2Q8IW92 636 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 MFSD4AQ8N468 514 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 MS4A15Q8N5U1 240 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 ASB17Q8WXJ9 295 aa22.79■■□□□ 1.24
CPNE1-205ENST00000401607 PPIL3Q9H2H8 161 aaKnown RBP22.79■■□□□ 1.24
CPNE1-205ENST00000401607 A0A075B6Q4 140 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 CLDN25C9JDP6 229 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 NPIPA2E9PIF3 369 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 NPIPA3F8WFD2 350 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 WNT11O96014 354 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 HRGP04196 525 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 EIF1AXP47813 144 aaKnown RBP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 RPS11P62280 158 aaKnown RBP eCLIP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF766Q5HY98 468 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 TEX30Q5JUR7 227 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF454Q8N9F8 522 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 ZIC4Q8N9L1 334 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 ZFP62Q8NB50 900 aaPredicted RBP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 MCHR2Q969V1 340 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 KCNS3Q9BQ31 491 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 PDCD1LG2Q9BQ51 273 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 TTYH2Q9BSA4 534 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 ABHD6Q9BV23 337 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 SLC6A15Q9H2J7 730 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 CSAG2Q9Y5P2 127 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 DCDC2BA2VCK2 349 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 ZNF823P16415 610 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 MRPL28Q13084 256 aaKnown RBP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 HNRNPA0Q13151 305 aaKnown RBP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 EIF2B1Q14232 305 aaKnown RBP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 LRRN1Q6UXK5 716 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 TRILQ7L0X0 811 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 C11orf40Q8WZ69 217 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 SF3B5Q9BWJ5 86 aaKnown RBP22.78■■□□□ 1.24
CPNE1-205ENST00000401607 KLK13Q9UKR3 277 aa22.78■■□□□ 1.24
CPNE1-205ENST00000401607 CNTRLQ7Z7A1 2325 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 SMIM30A4D0T7 59 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 J3QRK9 145 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 LHX2P50458 406 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 TNFSF10P50591 281 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 ROM1Q03395 351 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 RSPO4Q2I0M5 234 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-205ENST00000401607 DEFB109BQ30KR1 87 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 ACSM3Q53FZ2 586 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 FAM27D1Q5T7N8 215 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 CEACAM19Q7Z692 300 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 PNPLA5Q7Z6Z6 429 aaPredicted RBP22.77■■□□□ 1.24
CPNE1-205ENST00000401607 FNDC8Q8TC99 324 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 HAVCR2Q8TDQ0 301 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 S100ZQ8WXG8 99 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 MAP6Q96JE9 813 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 OR2M2Q96R28 347 aa22.77■■□□□ 1.24
CPNE1-205ENST00000401607 HSPB2A8KAH6 182 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 CASKO14936 926 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 EFSO43281 561 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 LAP3P28838 519 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ZNF846Q147U1 533 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 HSPB2Q16082 182 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 ABLIM2Q6H8Q1 611 aa22.76■■□□□ 1.23
CPNE1-205ENST00000401607 LRFN4Q6PJG9 635 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms