RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 C6orf52Q5T4I8 152 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 CPEB3Q8NE35 698 aaKnown RBP13.63□□□□□ -0.23
ATG4B-203ENST00000400772 NEU4Q8WWR8 484 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-203ENST00000400772 SYT3Q9BQG1 590 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 PIMREGQ9BSJ6 248 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 ANKRD19PQ9H560 264 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 GORASP2Q9H8Y8 452 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 DYNLRB1Q9NP97 96 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 ARL8BQ9NVJ2 186 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 REV1Q9UBZ9 1251 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 CD300AQ9UGN4 299 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 FZR1Q9UM11 496 aa13.63□□□□□ -0.23
ATG4B-203ENST00000400772 IGHV4-61A0A0C4DH41 118 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 A0A1W2PRQ8 180 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 SYNGR3O43761 229 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 DIRAS1O95057 198 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 IGHV4-31P0DP07 118 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 DAOP14920 347 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 ALDH3B1P43353 468 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 ERVK-25P63136 954 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 CD47Q08722 323 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 DGCR6Q14129 220 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 CARTPTQ16568 116 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 THEM4Q5T1C6 240 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 CYP4Z1Q86W10 505 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 RBP7Q96R05 134 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 BPESC1Q9GZL8 116 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 TPK1Q9H3S4 243 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 ARL2BPQ9Y2Y0 163 aa13.62□□□□□ -0.23
ATG4B-203ENST00000400772 A8MV72 311 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 SNAP29O95721 258 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 SEMG1P04279 462 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 SCG5P05408 212 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 H1F0P07305 194 aaKnown RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 FAM157BP0CG42 384 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 HSD17B1P14061 328 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 ZNF32P17041 273 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 RHCEP18577 417 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 TCN1P20061 433 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 GIFP27352 417 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 APEX1P27695 318 aaKnown RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 MSX2P35548 267 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 OMPP47874 163 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 LIMS1P48059 325 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 ERVS71-1P61550 626 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 RPS23P62266 143 aaKnown RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 GGTLC2Q14390 218 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 MAD2L1BPQ15013 274 aaPredicted RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 SEC23BQ15437 767 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 SGCAQ16586 387 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 ZBED5Q49AG3 693 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 PABPC1L2AQ5JQF8 200 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 FAM27BQ5VT28 67 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 FAM205BPQ63HN1 556 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 CYB5R2Q6BCY4 276 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 FOXL2NBQ6ZUU3 175 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 HIPK1Q86Z02 1210 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 ZNF786Q8N393 782 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 ARIH2OSQ8N7S6 290 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 FAM46AQ96IP4 442 aaKnown RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 DHRS1Q96LJ7 313 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 FUZQ9BT04 418 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 C1orf198Q9H425 327 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 TAGLN3Q9UI15 199 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 SAMD4AQ9UPU9 718 aaKnown RBP13.61□□□□□ -0.23
ATG4B-203ENST00000400772 ADAM18Q9Y3Q7 739 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
ATG4B-203ENST00000400772 TRBV4-1A0A0J9YWV2 114 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 IQCMA0A1B0GVH7 501 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 SLC22A23A1A5C7 686 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 A6NIZ1 184 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 LYNX1G3V0Z9 82 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 H7C1C5 153 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 M0R233 179 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 CLPTM1O96005 669 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 PTHP01270 115 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 CD14P08571 375 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 LYNX1P0DP58 116 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 NR2C1P13056 603 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 LAP3P28838 519 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 UCP2P55851 309 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 RAP1BP61224 184 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 LCN6P62502 163 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 RAP1AP62834 184 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 PSG4Q00888 419 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 PLP2Q04941 152 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 TBC1D28Q2M2D7 210 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 ELFN2Q5R3F8 820 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 RGS7BPQ6MZT1 257 aaPredicted RBP13.6□□□□□ -0.23
ATG4B-203ENST00000400772 RRM2BQ7LG56 351 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 FAM122BQ7Z309 247 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 OR1J2Q8NGS2 313 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 AKR7LQ8NHP1 331 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 FNDC8Q8TC99 324 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 UBASH3BQ8TF42 649 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 POM121L2Q96KW2 1035 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 Q96M85 177 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 LRRC37BQ96QE4 947 aa13.6□□□□□ -0.23
ATG4B-203ENST00000400772 CDRT15Q96T59 188 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms