RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 BAXQ07812 192 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 FAM111BQ6SJ93 734 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 MBOAT2Q6ZWT7 520 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 RHOUQ7L0Q8 258 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NLRP8Q86W28 1048 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 LILRA3Q8N6C8 439 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR52N1Q8NH53 320 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 DHRS9Q9BPW9 319 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NKX6-2Q9C056 277 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ZCCHC4Q9H5U6 513 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 RNF24Q9Y225 148 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 A0A087WZY1 265 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 TCRBV5S2A0A599 114 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 CLDN1O95832 211 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR10J4P0C629 311 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 GABRB1P18505 474 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 HTR2CP28335 458 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 CCSMST1Q4G0I0 132 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ACSM5Q6NUN0 579 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 TCTE3Q8IZS6 198 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 EID2Q8N6I1 236 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 MRPL43Q8N983 215 aaKnown RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR5D18Q8NGL1 313 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR52I2Q8NH67 350 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR14A16Q8NHC5 309 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 RAB3CQ96E17 227 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 KIRREL1Q96J84 757 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ATF6BQ99941 703 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 FKRPQ9H9S5 495 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 HEYLQ9NQ87 328 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ADAM29Q9UKF5 820 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 THSD7AQ9UPZ6 1657 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 A0A0A6YYJ9 748 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 PRAMEF27A3QJZ7 478 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 EIF1BO60739 113 aaKnown RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ACKR3P25106 362 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ITGB8P26012 769 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 HTR5AP47898 357 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 MTCP1P56278 107 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SLC35A1P78382 337 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CTF1Q16619 201 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 PRAMEF9Q5VWM5 478 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 TMEM88Q6PEY1 159 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 GTF2H5Q6ZYL4 71 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 MCATQ8IVS2 390 aaKnown RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CPEB3Q8NE35 698 aaKnown RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 YIPF6Q96EC8 236 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SLC46A1Q96NT5 459 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CDC14CA4D256 554 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 KLK8O60259 260 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 NSA2O95478 260 aaKnown RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 GPR75O95800 540 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CER1O95813 267 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CPMP14384 443 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 DTYMKP23919 212 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 MAOBP27338 520 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 XCR1P46094 333 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 KIAA0141Q14154 515 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CLINT1Q14677 625 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF750Q32MQ0 723 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SHEQ5VZ18 495 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 Q6ZTK2 550 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 AAED1Q7RTV5 226 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 LGI3Q8N145 548 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CISD2Q8N5K1 135 aaKnown RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 STT3BQ8TCJ2 826 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 BADQ92934 168 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 NEURL3Q96EH8 262 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 BOD1Q96IK1 185 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SLC41A2Q96JW4 573 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 GLIPR2Q9H4G4 154 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 PLEKHF2Q9H8W4 249 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SPACA1Q9HBV2 294 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CBLCQ9ULV8 474 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 RPH3ALQ9UNE2 315 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CHST2Q9Y4C5 530 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ETV7Q9Y603 341 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 FITM1A5D6W6 292 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF593O00488 134 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 IMPA2O14732 288 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ENSAO43768 121 aaKnown RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ADRB1P08588 477 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF728P0DKX0 622 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 GABRA4P48169 554 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 MFAP5Q13361 173 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 IKZF1Q13422 519 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 PDZD11Q5EBL8 140 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 OR10K2Q6IF99 312 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF705AQ6ZN79 300 aaPredicted RBP8.16□□□□□ -1.1
PTPRM-202ENST00000400053 Q6ZRG5 221 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 HIST2H3AQ71DI3 136 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF595Q8IYB9 648 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SLC35G3Q8N808 338 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 NHLRC2Q8NBF2 726 aa8.16□□□□□ -1.1
PTPRM-202ENST00000400053 SEMA6DQ8NFY4 1073 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms