RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 LRRC28Q86X40 367 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 SLC25A43Q8WUT9 341 aaPredicted RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 COQ10AQ96MF6 247 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 ERVMER34-1Q9H9K5 563 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 KIAA1456Q9P272 454 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 ONECUT1Q9UBC0 465 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 A0A1W2PR80 420 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 PMS2P1A4D2B8 440 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 BOLA2-SMG1P6H3BVE0 249 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR11G2Q8NGC1 345 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR51E1Q8TCB6 317 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 SLCO4A1Q96BD0 722 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 OR52A5Q9H2C5 316 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 KIF25Q9UIL4 384 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 HMGN4O00479 90 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 RGS11O94810 467 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 SHC1P29353 583 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 FABP6P51161 128 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 ZNF766Q5HY98 468 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 NKAIN4Q8IVV8 208 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 NRIP3Q9NQ35 241 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 URB1O60287 2271 aaKnown RBP10.39□□□□□ -0.75
TTC28-201ENST00000397906 SELEP16581 610 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 C16orf52Q8NHV5 167 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 GPR119Q8TDV5 335 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TCTEX1D2Q8WW35 142 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 TJP1Q07157 1748 aa10.39□□□□□ -0.75
TTC28-201ENST00000397906 GMDSO60547 372 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 MAP2K6P52564 334 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 IL34Q6ZMJ4 242 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 ABHD11Q8NFV4 315 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CNTNAP3BQ96NU0 1288 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 GPATCH2Q9NW75 528 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 MT-ATP6P00846 226 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CHATP28329 748 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 RAB11AP62491 216 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 AARDQ4LEZ3 155 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 OR14K1Q8NGZ2 314 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 DEDD2Q8WXF8 326 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 SHARPINQ9H0F6 387 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CNOT2Q9NZN8 540 aaKnown RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 METTL12A8MUP2 240 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CDK4P11802 303 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 SSTR2P30874 369 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 OR8G2PQ6IF36 304 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 DNAJC5GQ8N7S2 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 KISS1RQ969F8 398 aaPredicted RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 TRMT61AQ96FX7 289 aaKnown RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 OR2B2Q9GZK3 357 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CLDN24A6NM45 220 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 P2RX6O15547 441 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 OLFM2O95897 454 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 PCSK6P29122 969 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 FZR1Q9UM11 496 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 M0QYG6 137 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 MSTNO14793 375 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 F2RP25116 425 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CPNE4Q96A23 557 aaPredicted RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 GINS3Q9BRX5 216 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 TMEM43Q9BTV4 400 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 ZNF225Q9UK10 706 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 ABCD4O14678 606 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 OR8U8P0C7N1 319 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CPT2P23786 658 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 S100A7P31151 101 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 PMPCAQ10713 525 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 ZMAT1Q5H9K5 638 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 TMEM200AQ86VY9 491 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 PRR7Q8TB68 274 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 REEP6Q96HR9 211 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 C1orf123Q9NWV4 160 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 WSB2Q9NYS7 404 aaPredicted RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 SHROOM3Q8TF72 1996 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 GFYI3L273 518 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 MBTPS2O43462 519 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 APOA2P02652 100 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A6P0DMU7 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A5P0DMU8 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A7P0DMV0 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A8P0DMV1 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A9P0DMV2 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 T-ENOLP0DO92 83 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 TEAD1P28347 426 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A2Q5DJT8 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A1Q5HYN5 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CT45A3Q8NHU0 189 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.38□□□□□ -0.75
TTC28-201ENST00000397906 OR6C65A6NJZ3 312 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 SHISA8B8ZZ34 492 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 CEACAM5P06731 702 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 RAB13P51153 203 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 GALEQ14376 348 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 Q6ZNB5 142 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 HPSE2Q8WWQ2 592 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 TSSK2Q96PF2 358 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 HRH4Q9H3N8 390 aa10.38□□□□□ -0.75
TTC28-201ENST00000397906 SPTY2D1-AS1A0A0U1RR47 76 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms