RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 YIF1BQ5BJH7 314 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PLCXD3Q63HM9 321 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 TMEM211Q6ICI0 200 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 WDR88Q6ZMY6 472 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SULF2Q8IWU5 870 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SNRNP27Q8WVK2 155 aaKnown RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SCNM1Q9BWG6 230 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PAPOLGQ9BWT3 736 aaKnown RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 AKIRIN1Q9H9L7 192 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 OBP2BQ9NPH6 170 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 QPCTLQ9NXS2 382 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 COMMD9Q9P000 198 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 AK6Q9Y3D8 172 aaKnown RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 V9GY05 133 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 LIPT2A6NK58 231 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 FADS1O60427 444 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PITPNBP48739 271 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 RPS23P62266 143 aaKnown RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 FUT5Q11128 374 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 CEACAM16Q2WEN9 425 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 CCDC58Q4VC31 144 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 LIPNQ5VXI9 398 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 DPPA2Q7Z7J5 298 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 NANOGP1Q8N7R0 232 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 APCDD1LQ8NCL9 501 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 OR4Q3Q8NH05 313 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PIGCQ92535 297 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 MOGAT1Q96PD6 335 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 ENAMQ9NRM1 1142 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 TAS2R16Q9NYV7 291 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PLEKHA6Q9Y2H5 1048 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 CENPVL1A0A0U1RR11 272 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 FAM230AA0A1W2PPH8 454 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 GABRPO00591 440 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 HSPA12AO43301 675 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SULT1C4O75897 302 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 VASH1Q7L8A9 365 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF679Q8IYX0 411 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 OR9K2Q8NGE7 335 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 OR6S1Q8NH40 331 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 FCAMRQ8WWV6 532 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 TMEM106AQ96A25 262 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 ALKBH3Q96Q83 286 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 FOXB1Q99853 325 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PDCD10Q9BUL8 212 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 TTTY12Q9BZ98 90 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 NDRG3Q9UGV2 375 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 FBXL3Q9UKT7 428 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 HELZP42694 1942 aaKnown RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 A0A1W2PQL4 384 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 IL1AP01583 271 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 C1QCP02747 245 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SLC2A5P22732 501 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PLA2G2CQ5R387 149 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 ATAD3CQ5T2N8 411 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF684Q5T5D7 378 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SYT6Q5T7P8 510 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 HES5Q5TA89 166 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 BOLLQ8N9W6 283 aaKnown RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 BBS1Q8NFJ9 593 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 PPP1R35Q8TAP8 253 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 HTRA1Q92743 480 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 KISS1RQ969F8 398 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-204ENST00000397606 OR5M11Q96RB7 305 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 SLC25A18Q9H1K4 315 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 MAN2C1Q9NTJ4 1040 aa7.44□□□□□ -1.22
PTPRD-204ENST00000397606 DSPPQ9NZW4 1301 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ZC3H12DA2A288 527 aaKnown RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 H3BMQ9 156 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 CDC42EP2O14613 210 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 RBBP9O75884 186 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 TFAP2AP05549 437 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 MOB3CQ70IA8 216 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ATF6BQ99941 703 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 SLC22A4Q9H015 551 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF442Q9H7R0 627 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 CLEC2DQ9UHP7 191 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 GBF1Q92538 1859 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 A0A1B0GW55 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ORC5O43913 435 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 TIMM8AO60220 97 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-204ENST00000397606 HTR3BO95264 441 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 PMS2P2O95744 297 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 CRYAAP02489 173 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DUX4L2P0CJ85 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DUX4L3P0CJ86 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DUX4L4P0CJ87 422 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DUX4L5P0CJ88 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DUX4L6P0CJ89 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 DUX4L7P0CJ90 424 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 CX3CR1P49238 355 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 NKPD1Q17RQ9 610 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 PLPPR5Q32ZL2 321 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 VHLLQ6RSH7 139 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 PGAP1Q75T13 922 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 MKXQ8IYA7 352 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 OR52N5Q8NH56 324 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ABHD4Q8TB40 342 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 CRLF2Q9HC73 371 aa7.43□□□□□ -1.22
PTPRD-204ENST00000397606 ING3Q9NXR8 418 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms