RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 EPHA2P29317 976 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 GUCA1AP43080 201 aaPredicted RBP14.37□□□□□ -0.11
AP1S3-202ENST00000396653 UBE2NP61088 152 aaKnown RBP14.37□□□□□ -0.11
AP1S3-202ENST00000396653 SNTB1Q13884 538 aaKnown RBP14.37□□□□□ -0.11
AP1S3-202ENST00000396653 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 LPCAT4Q643R3 524 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 OR2T4Q8NH00 348 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 NABP1Q96AH0 204 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 PLEKHA8Q96JA3 519 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 WACQ9BTA9 647 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 GRIP2Q9C0E4 1043 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 SIAEQ9HAT2 523 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 NGBQ9NPG2 151 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 B9D1Q9UPM9 204 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 PTPN13Q12923 2485 aa14.37□□□□□ -0.11
AP1S3-202ENST00000396653 A0A096LPE4 126 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 A0A1W2PPL8 197 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 A0A1W2PPZ6 126 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 DCTN6O00399 190 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 UBL3O95164 117 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 MSR1P21757 451 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 LAP3P28838 519 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 CENPAP49450 140 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 GLO1Q04760 184 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 DAZAP2Q15038 168 aaPredicted RBP14.36□□□□□ -0.11
AP1S3-202ENST00000396653 ETFDHQ16134 617 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 FAM27BQ5VT28 67 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 SEZ6L2Q6UXD5 910 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 C22orf34Q6ZV56 151 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 GLB1L2Q8IW92 636 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 OR6V1Q8N148 313 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 FAM169BQ8N8A8 192 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 CYB561A3Q8NBI2 242 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 OR52N5Q8NH56 324 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 HRASLS5Q96KN8 279 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 TSSK2Q96PF2 358 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 VCXQ9H320 206 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 TOR3AQ9H497 397 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 POLE4Q9NR33 117 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 SMPD3Q9NY59 655 aaPredicted RBP14.36□□□□□ -0.11
AP1S3-202ENST00000396653 PKDREJQ9NTG1 2253 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 PRR14LQ5THK1 2151 aa14.36□□□□□ -0.11
AP1S3-202ENST00000396653 PRR23D1E9PI22 279 aaPredicted RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 CASKO14936 926 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 ATP6V1G2O95670 118 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 PRR23D2P0DMB1 279 aaPredicted RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 GAAP10253 952 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 POLR2IP36954 125 aaKnown RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 PTDSS1P48651 473 aaKnown RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 BLVRAP53004 296 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 SNAPC1Q16533 368 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 KCNMB1Q16558 191 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 LRRC36Q1X8D7 754 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 C3orf36Q3SXR2 165 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 WFDC8Q8IUA0 241 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 ZC3HAV1LQ96H79 300 aaKnown RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 MBOAT4Q96T53 435 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 PITX2Q99697 317 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 B3GNT2Q9NY97 397 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 TVP23BQ9NYZ1 205 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 ZNF224Q9NZL3 707 aa14.35□□□□□ -0.11
AP1S3-202ENST00000396653 CRNNQ9UBG3 495 aaPredicted RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 COA3Q9Y2R0 106 aaPredicted RBP14.35□□□□□ -0.11
AP1S3-202ENST00000396653 PRODHO43272 600 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SNAP29O95721 258 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 HRGP04196 525 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 CST2P09228 141 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SPI1P17947 270 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 CDAP32320 146 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 CDC42P60953 191 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 LSM6P62312 80 aaKnown RBP14.34□□□□□ -0.11
AP1S3-202ENST00000396653 EFNB1P98172 346 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 ZIK1Q3SY52 487 aaPredicted RBP14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SLC36A2Q495M3 483 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 BEX5Q5H9J7 111 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SLC16A14Q7RTX9 510 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SYT9Q86SS6 491 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SKA3Q8IX90 412 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 PROKR2Q8NFJ6 384 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SLC26A10Q8NG04 563 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 OR9Q1Q8NGQ5 310 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 KCNN2Q9H2S1 579 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 RERGLQ9H628 205 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SEC61A2Q9H9S3 476 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 SRA1Q9HD15 236 aaKnown RBP14.34□□□□□ -0.11
AP1S3-202ENST00000396653 HINT3Q9NQE9 182 aaKnown RBP14.34□□□□□ -0.11
AP1S3-202ENST00000396653 FBXL3Q9UKT7 428 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 NDRG4Q9ULP0 352 aaKnown RBP14.34□□□□□ -0.11
AP1S3-202ENST00000396653 MOKQ9UQ07 419 aa14.34□□□□□ -0.11
AP1S3-202ENST00000396653 COL12A1Q99715 3063 aa14.33□□□□□ -0.11
AP1S3-202ENST00000396653 A0A1W2PR80 420 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 DLGAP1O14490 977 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 SLC16A6O15403 523 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 IGKV3-15P01624 115 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 CBR1P16152 277 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 COL8A1P27658 744 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 GGT2P36268 569 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 ARR3P36575 388 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 CAPZA2P47755 286 aa14.33□□□□□ -0.12
AP1S3-202ENST00000396653 HSF2Q03933 536 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms