RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 IGHV1-18A0A0C4DH31 117 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 SLC22A23A1A5C7 686 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 XKRYO14609 159 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 ABCD4O14678 606 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 EI24O14681 340 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 TXNDC12O95881 172 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 TP53P04637 393 aaPredicted RBP14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CELA3BP08861 270 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CBR1P16152 277 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 SDHAP31040 664 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CDAP32320 146 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CDKN2AP42771 156 aaKnown RBP14.42□□□□□ -0.1
CXCL1-201ENST00000395761 PTDSS1P48651 473 aaKnown RBP14.42□□□□□ -0.1
CXCL1-201ENST00000395761 RPS6KA3P51812 740 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 KRR1Q13601 381 aaKnown RBP14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CLEC12AQ5QGZ9 265 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 C1QTNF12Q5T7M4 302 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 ADAM5Q6NVV9 412 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 TMEM108Q6UXF1 575 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 PTCHD4Q6ZW05 846 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CDH24Q86UP0 819 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 MDP1Q86V88 176 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CCDC36Q8IYA8 594 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 OR8D4Q8NGM9 314 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 VCX3BQ9H321 246 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 SEC61A2Q9H9S3 476 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 IL20Q9NYY1 176 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 KIF17Q9P2E2 1029 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CRNNQ9UBG3 495 aaPredicted RBP14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CDH10Q9Y6N8 788 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 CSMD2Q7Z408 3487 aa14.42□□□□□ -0.1
CXCL1-201ENST00000395761 PRSS37A4D1T9 235 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 SHISA9B4DS77 424 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 H0YJX3 145 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 ARPC3O15145 178 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 OR8G3PP0DMU2 310 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 CD79AP11912 226 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 OSMP13725 252 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 APEHP13798 732 aaKnown RBP14.41□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF84P51523 738 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 ETFDHQ16134 617 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 LRRC36Q1X8D7 754 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 MYPOPQ86VE0 399 aaPredicted RBP14.41□□□□□ -0.1
CXCL1-201ENST00000395761 AKAP1Q92667 903 aaKnown RBP eCLIP14.41□□□□□ -0.1
CXCL1-201ENST00000395761 RDH12Q96NR8 316 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 SLC38A2Q96QD8 506 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 PAPOLBQ9NRJ5 636 aaKnown RBP14.41□□□□□ -0.1
CXCL1-201ENST00000395761 KRT84Q9NSB2 600 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 ENOPH1Q9UHY7 261 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 ST6GALNAC2Q9UJ37 374 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 PLEKHA6Q9Y2H5 1048 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 ROS1P08922 2347 aa14.41□□□□□ -0.1
CXCL1-201ENST00000395761 CADP27708 2225 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 SOX14O95416 240 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 IGKV3-15P01624 115 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 IGLV1-44P01699 117 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 CECR9P0C854 216 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 NR2C1P13056 603 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 CTLA4P16410 223 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 IGFBP5P24593 272 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 GIPRP48546 466 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 IDH3GP51553 393 aaPredicted RBP14.4□□□□□ -0.1
CXCL1-201ENST00000395761 RAD23AP54725 363 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 ESRRGP62508 458 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 MRPS34P82930 218 aaKnown RBP14.4□□□□□ -0.1
CXCL1-201ENST00000395761 DBPQ10586 325 aaPredicted RBP14.4□□□□□ -0.1
CXCL1-201ENST00000395761 SNCBQ16143 134 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 SGCAQ16586 387 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 RPL13AP3Q6NVV1 102 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 PAMR1Q6UXH9 720 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 OR4K13Q8NH42 304 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 NABP1Q96AH0 204 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF75AQ96N20 296 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 SYT4Q9H2B2 425 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 VCXQ9H320 206 aa14.4□□□□□ -0.1
CXCL1-201ENST00000395761 VSX1Q9NZR4 365 aaPredicted RBP14.4□□□□□ -0.1
CXCL1-201ENST00000395761 E9PQ18 207 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 DLGAP1O14490 977 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 BHLHE40O14503 412 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 HS3ST1O14792 307 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 AHCYL1O43865 530 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 MITFO75030 526 aaPredicted RBP14.39□□□□□ -0.11
CXCL1-201ENST00000395761 ATE1O95260 518 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 SCG5P05408 212 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 HIST1H1CP16403 213 aaKnown RBP14.39□□□□□ -0.11
CXCL1-201ENST00000395761 ARR3P36575 388 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 RAB1AP62820 205 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 NPRL3Q12980 569 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 GSG1Q2KHT4 349 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 ZNF672Q499Z4 452 aaPredicted RBP14.39□□□□□ -0.11
CXCL1-201ENST00000395761 SLC35F1Q5T1Q4 408 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 SLC22A25Q6T423 547 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 B3GLCTQ6Y288 498 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 ADCK1Q86TW2 530 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 LRRC18Q8N456 261 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 GALNT4Q8N4A0 578 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 FAM169BQ8N8A8 192 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 FNDC8Q8TC99 324 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 FOXN4Q96NZ1 517 aa14.39□□□□□ -0.11
CXCL1-201ENST00000395761 TSSK2Q96PF2 358 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms