RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 FPR3P25089 353 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 LAP3P28838 519 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 APOBEC3AP31941 199 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF133P52736 654 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 SMIM11AP58511 58 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 CHRNB3Q05901 458 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 DAG1Q14118 895 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 TAF11Q15544 211 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ADIPOQQ15848 244 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 MST1LQ2TV78 715 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 DNAL1Q4LDG9 190 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM98BQ52LJ0 330 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 MTX3Q5HYI7 312 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 CLEC12AQ5QGZ9 265 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 SHEQ5VZ18 495 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF544Q6NX49 715 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 PGM2L1Q6PCE3 622 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 SMARCD3Q6STE5 483 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 UGT2A3Q6UWM9 527 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 Q71RC1 249 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 HDDC2Q7Z4H3 204 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 SPATA24Q86W54 205 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZCCHC24Q8N2G6 241 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 SVOPLQ8N434 492 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM169BQ8N8A8 192 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 AQP11Q8NBQ7 271 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 AKR7LQ8NHP1 331 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 CANT1Q8WVQ1 401 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 TSSK2Q96PF2 358 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ERMAPQ96PL5 475 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 RBP7Q96R05 134 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 TEP1Q99973 2627 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 CADM1Q9BY67 442 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 PLA2G12AQ9BZM1 189 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 SYT4Q9H2B2 425 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR52D1Q9H346 318 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 MUC13Q9H3R2 512 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 FN3KQ9H479 309 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 MAGIXQ9H6Y5 334 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 KRCC1Q9NPI7 259 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 NRIP3Q9NQ35 241 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 STX18Q9P2W9 335 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ANK3Q12955 4377 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 DHRS12A0PJE2 317 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 PRSS37A4D1T9 235 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 A6NIZ1 184 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 DCTN6O00399 190 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 XKRYO14609 159 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 GSC2O15499 205 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SSX4O60224 188 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 MGRN1O60291 552 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC16A7O60669 478 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 DNAJC8O75937 253 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 CCNB2O95067 398 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SOX14O95416 240 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 STAMBPO95630 424 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 GASTP01350 101 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SERPINA5P05154 406 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 RAP2AP10114 183 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF35P13682 527 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 CCNOP22674 350 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 NR4A1P22736 598 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 APEX1P27695 318 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SDHAP31040 664 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SERPINF1P36955 418 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 CDKN2AP42771 156 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 GSSP48637 474 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 RAP1BP61224 184 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ERVS71-1P61550 626 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 RAP1AP62834 184 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 MRPS34P82930 218 aaKnown RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 HSF2Q03933 536 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 BNIP1Q12981 228 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 FLOT2Q14254 428 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 MEP1BQ16820 701 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SWI5Q1ZZU3 235 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 CLEC12BQ2HXU8 276 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 RFX4Q33E94 735 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 C3orf36Q3SXR2 165 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ANKDD1AQ495B1 522 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC36A2Q495M3 483 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 PABPC1L2AQ5JQF8 200 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 THEM4Q5T1C6 240 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC35F1Q5T1Q4 408 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 C1QTNF12Q5T7M4 302 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM205BPQ63HN1 556 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR2T5Q6IEZ7 315 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF770Q6IQ21 691 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 C1orf94Q6P1W5 598 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 TMEM53Q6P2H8 277 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 LEG1Q6P5S2 330 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 DPY19L2P2Q6ZN68 376 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF620Q6ZNG0 422 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 TMEM179BQ7Z7N9 219 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 LRP11Q86VZ4 500 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 CCDC36Q8IYA8 594 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 HS3ST5Q8IZT8 346 aa6.62□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF525Q8N782 197 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms