RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 EGFP01133 1207 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 STAG3L3P0CL85 134 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 CD37P11049 281 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 BMP5P22003 454 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 PCGF2P35227 344 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 P2RY14Q15391 338 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 LURAP1LQ8IV03 231 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 HRASLSQ9HDD0 168 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 GLULP15104 373 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 EDDM3BP56851 147 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 NHSL2Q5HYW2 709 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 RIPPLY2Q5TAB7 128 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 NRMQ8IXM6 262 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 DMBX1Q8NFW5 382 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 PCYT2Q99447 389 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 DDA1Q9BW61 102 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 MARCH4Q9P2E8 410 aaPredicted RBP9.96□□□□□ -0.81
CLCN4-202ENST00000380833 LTBP3Q9NS15 1303 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 ZNF840PA6NDX5 716 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 BCAT2O15382 392 aaPredicted RBP9.96□□□□□ -0.81
CLCN4-202ENST00000380833 ZNF250P15622 560 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 MTNR1BP49286 362 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 LTBQ06643 244 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 EDDM3AQ14507 147 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 BAP18Q8IXM2 172 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 ZNRF4Q8WWF5 429 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 MIB2Q96AX9 1013 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 FAM210BQ96KR6 192 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 SAMD8Q96LT4 415 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 RSG1Q9BU20 258 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 KLHL13Q9P2N7 655 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 CSAG2Q9Y5P2 127 aa9.96□□□□□ -0.81
CLCN4-202ENST00000380833 C1orf226A1L170 272 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 OR2A25A4D2G3 310 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 HAND1O96004 215 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 TCN2P20062 427 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 BCKDHBP21953 392 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 IVDP26440 423 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 EMP1P54849 157 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 HSD17B11Q8NBQ5 300 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 RAB24Q969Q5 203 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 PECRQ9BY49 303 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 RAB18Q9NP72 206 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 FOXJ2Q9P0K8 574 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 SLC45A1Q9Y2W3 748 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 FZD9O00144 591 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 DVL2O14641 736 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 EIF3GO75821 320 aaKnown RBP eCLIP9.96□□□□□ -0.82
CLCN4-202ENST00000380833 CD46P15529 392 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 TAZQ16635 292 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 SLC36A2Q495M3 483 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 HSF5Q4G112 596 aaPredicted RBP9.96□□□□□ -0.82
CLCN4-202ENST00000380833 SLC22A6Q4U2R8 563 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 RAB6CQ53S08 254 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM268Q5VZI3 342 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 TMEM65Q6PI78 240 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 IGDCC3Q8IVU1 814 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF430Q9H8G1 570 aaPredicted RBP9.96□□□□□ -0.82
CLCN4-202ENST00000380833 hCG_1809904A0A1W2PP81 198 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1W2PR64 198 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 A0A1W2PRV1 198 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 OR5H15A6NDH6 313 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 OR5H1A6NKK0 313 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 DEFA4P12838 97 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 PTGER4P35408 488 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 PTGFRP43088 359 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 LGALS4P56470 323 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 MAMDC2Q7Z304 686 aaPredicted RBP9.96□□□□□ -0.82
CLCN4-202ENST00000380833 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
CLCN4-202ENST00000380833 CMTM2Q8TAZ6 248 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 NICN1Q9BSH3 213 aa9.96□□□□□ -0.82
CLCN4-202ENST00000380833 KIF20BQ96Q89 1820 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 OR5K4A6NMS3 321 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 GJB3O75712 270 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 RPS18P62269 152 aaKnown RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 HBG1P69891 147 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 HBG2P69892 147 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF273Q14593 569 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF718Q3SXZ3 478 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 DCAF12Q5T6F0 453 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 SLC35G3Q8N808 338 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 BHLHE23Q8NDY6 225 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 OR1S2Q8NGQ3 325 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 CDS1Q92903 461 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 KIRREL1Q96J84 757 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 GLYR1Q49A26 553 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 NUDT10Q8NFP7 164 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 FAAP24Q9BTP7 215 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 ALX4Q9H161 411 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 LOC102723971A0A1B0GUV8 181 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 CALCBP10092 127 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF26P17031 533 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 TIA1P31483 386 aaKnown RBP eCLIP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 DVL1P1P54792 670 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 GAB1Q13480 694 aa9.95□□□□□ -0.82
CLCN4-202ENST00000380833 ZNF468Q5VIY5 522 aaPredicted RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 TSEN54Q7Z6J9 526 aaKnown RBP9.95□□□□□ -0.82
CLCN4-202ENST00000380833 OR5AS1Q8N127 324 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms