RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CTF1Q16619 201 aa17.13■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ZNF684Q5T5D7 378 aa17.13■□□□□ 0.33
CNTNAP3B-203ENST00000377561 NMNAT2Q9BZQ4 307 aa17.13■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RAB22AQ9UL26 194 aa17.13■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RPS2P15880 293 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 APOBEC1P41238 236 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLC9A3R2Q15599 337 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 Q6ZTK2 550 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 OR11L1Q8NGX0 322 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 FGGYQ96C11 551 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLC19A3Q9BZV2 496 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLC38A1Q9H2H9 487 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 COA3Q9Y2R0 106 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 GNB3P16520 340 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 FABP5Q01469 135 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 NPSR1Q6W5P4 371 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 KIAA1958Q8N8K9 716 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PLPP7Q8NBV4 271 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 TMEM43Q9BTV4 400 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SELENOIQ9C0D9 397 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 DOK2O60496 412 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 OR7C1O76099 320 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RAF1P04049 648 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RAB6AP20340 208 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PCNPQ8WW12 178 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 LAT2Q9GZY6 243 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RNF212BA8MTL3 300 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ZNF93P35789 620 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RDH10Q8IZV5 341 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 C16orf52Q8NHV5 167 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 TCTEX1D2Q8WW35 142 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLAMF9Q96A28 289 aa17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ZNF775Q96BV0 537 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3B-203ENST00000377561 GABARAPH6UMI1 98 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 GMDSO60547 372 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CAPZBP47756 277 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RRADP55042 308 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 KCNAB1Q14722 419 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PIGQQ9BRB3 760 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 MYOTQ9UBF9 498 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CD160O95971 181 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 KITLGP21583 273 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SRP9P49458 86 aaKnown RBP17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CDC20Q12834 499 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 WDR34Q96EX3 536 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 POU3F3P20264 500 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 RAB4AP20338 218 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 HCCSP53701 268 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 F2RL1P55085 397 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 BTG2P78543 158 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 NKAIN1Q4KMZ8 207 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PRSS45Q7RTY3 260 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SUMF2Q8NBJ7 301 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 OR4N2Q8NGD1 307 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 FGF14Q92915 247 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 MED18Q9BUE0 208 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 HIPK2Q9H2X6 1198 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SIRT5Q9NXA8 310 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 M0R082 166 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 TAS2R30P59541 319 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CATR1Q13166 79 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PEA15Q15121 130 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CREB3L2Q70SY1 520 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLC25A43Q8WUT9 341 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CISD3P0C7P0 127 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PTGER4P35408 488 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 HTR4Q13639 388 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLC36A2Q495M3 483 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 VHLLQ6RSH7 139 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 DCBLD2Q96PD2 775 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SLC25A21Q9BQT8 299 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CHRNA9Q9UGM1 479 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 A4GNTQ9UNA3 340 aa17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 NOSIPQ9Y314 301 aaKnown RBP17.11■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PDLIM3Q53GG5 364 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 CSF3RQ99062 836 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 GAREM1Q9H706 876 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PRDM7Q9NQW5 492 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 TRAPPC2LQ9UL33 140 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 COPS3Q9UNS2 423 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 IGHV3-20A0A0C4DH32 117 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PRAMEF27A3QJZ7 478 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ZNF705FA8MVS1 300 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ZNF705DP0CH99 300 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ZNF705BP0CI00 300 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 ACHEP22303 614 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 BLVRBP30043 206 aaPredicted RBP17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 MC2RQ01718 297 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 BEX5Q5H9J7 111 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 SFRP5Q5T4F7 317 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PRAMEF9Q5VWM5 478 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 OR52W1Q6IF63 320 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 PAQR8Q8TEZ7 354 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 FKRPQ9H9S5 495 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 HIF1ANQ9NWT6 349 aa17.1■□□□□ 0.33
CNTNAP3B-203ENST00000377561 GNG13Q9P2W3 67 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms