RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 DUX4L7P0CJ90 424 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 PSMD4P55036 377 aaKnown RBP12.54□□□□□ -0.4
SF1-205ENST00000377394 AP3S2P59780 193 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
SF1-205ENST00000377394 STX4Q12846 297 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 OLFML2AQ68BL7 652 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 PWWP2BQ6NUJ5 590 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 LEG1Q6P5S2 330 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 ZNF511Q8NB15 262 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 DMBX1Q8NFW5 382 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 OR13H1Q8NG92 308 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 C1orf216Q8TAB5 229 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 Q96M85 177 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 DUX4Q9UBX2 424 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 GPN3Q9UHW5 284 aaPredicted RBP12.54□□□□□ -0.4
SF1-205ENST00000377394 FOXJ3Q9UPW0 622 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 KLHDC2Q9Y2U9 406 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 HEATR5AQ86XA9 2040 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 PMS2P1A4D2B8 440 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 CTNSO60931 367 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 TNFP01375 233 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
SF1-205ENST00000377394 MGMTP16455 207 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 CSF2RBP32927 897 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 CTHP32929 405 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 PRPS1P60891 318 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 ERV3-1Q14264 604 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 ATXN7L3Q14CW9 347 aaPredicted RBP12.54□□□□□ -0.4
SF1-205ENST00000377394 H3F3CQ6NXT2 135 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 TMEM71Q6P5X7 295 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 FRMD1Q8N878 549 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 C16orf52Q8NHV5 167 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 TSSK2Q96PF2 358 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 SEMA6CQ9H3T2 930 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 RXFP3Q9NSD7 469 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 SZT2Q5T011 3432 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 EML5Q05BV3 1969 aa12.54□□□□□ -0.4
SF1-205ENST00000377394 UPK3AO75631 287 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 UBBP0CG47 229 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 UBCP0CG48 685 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 AKT2P31751 481 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 AQP2P41181 271 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 PGDP52209 483 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 RPS27AP62979 156 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 UBA52P62987 128 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 BTG2P78543 158 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 DCDP81605 110 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 HABP2Q14520 560 aaPredicted RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 ZNF542PQ5EBM4 170 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 FAM122BQ7Z309 247 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 C7orf61Q8IZ16 206 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 LRRC75AQ8NAA5 344 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 SYNPRQ8TBG9 265 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 UTP23Q9BRU9 249 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 ZNF471Q9BX82 626 aaPredicted RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 MKL2Q9ULH7 1088 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 KIR2DS5A0A0G2JLQ3 304 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 A0A0G2JNG1 304 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 KIR2DS3K7RE56 304 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 TMEM127O75204 238 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 SNAPC5O75971 98 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 ACTL6AO96019 429 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 RNH1P13489 461 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 KIR2DS5Q14953 304 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 LRRC37A5PQ49AS3 106 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 KLHL26Q53HC5 615 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 TMEM69Q5SWH9 247 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 STAC2Q6ZMT1 411 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 SPAG16Q8N0X2 631 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 EID2Q8N6I1 236 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 AVL9Q8NBF6 648 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 DUSP19Q8WTR2 217 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 PIGMQ9H3S5 423 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 ZFP57Q9NU63 452 aa12.53□□□□□ -0.4
SF1-205ENST00000377394 MRM2Q9UI43 246 aaKnown RBP12.53□□□□□ -0.4
SF1-205ENST00000377394 EPOPA6NHQ4 379 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 ITGA10O75578 1167 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 OR8G3PP0DMU2 310 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 ADRA2CP18825 462 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 CDK2P24941 298 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 PBX2P40425 430 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 SLC25A1P53007 311 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 C9orf50Q5SZB4 431 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 SLC16A9Q7RTY1 509 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 OOSP2Q86WS3 158 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 S100A16Q96FQ6 103 aaKnown RBP12.52□□□□□ -0.4
SF1-205ENST00000377394 LMF1Q96S06 567 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 HIF3AQ9Y2N7 669 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 HS3ST3A1Q9Y663 406 aa12.52□□□□□ -0.4
SF1-205ENST00000377394 TMEM72A0PK05 275 aa12.52□□□□□ -0.41
SF1-205ENST00000377394 BLOC1S5-TXNDC5H3BN57 136 aa12.52□□□□□ -0.41
SF1-205ENST00000377394 OIP5O43482 229 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms