RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 LOXHD1Q8IVV2 1947 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 TMEM11P17152 192 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 ARR3P36575 388 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 ZNF529Q6P280 563 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 ANKRD16Q6P6B7 361 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 WDR5BQ86VZ2 330 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 FUNDC1Q8IVP5 155 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 TBXA2RP21731 343 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 OMGP23515 440 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 GUSBP11Q6P575 273 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 DHRS4L2Q6PKH6 230 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 FBXL6Q8N531 539 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 SUCNR1Q9BXA5 334 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 KIF25Q9UIL4 384 aa12.46□□□□□ -0.41
GPC6-201ENST00000377047 SLC22A23A1A5C7 686 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 CLDN24A6NM45 220 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 ADPRMQ3LIE5 342 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 C1orf210Q8IVY1 113 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 INTS12Q96CB8 462 aaKnown RBP12.46□□□□□ -0.42
GPC6-201ENST00000377047 MBTPS2O43462 519 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 CLDN1O95832 211 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 NAGAP17050 411 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 METAP1P53582 386 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 DYRK1AQ13627 763 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 CD300LGQ6UXG3 332 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 PAQR8Q8TEZ7 354 aa12.46□□□□□ -0.42
GPC6-201ENST00000377047 GABARAPH6UMI1 98 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CTDSP2O14595 271 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 GABARAPO95166 117 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 FAM157BP0CG42 384 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZMAT1Q5H9K5 638 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CST9LP1Q5W188 147 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 TXNL4BQ9NX01 149 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZNF346Q9UL40 294 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 SLC22A20A6NK97 555 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZNF254O75437 659 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CRYAAP02489 173 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 BAXQ07812 192 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 HNF4GQ14541 408 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZNF468Q5VIY5 522 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 TCTN3Q6NUS6 607 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CORO6Q6QEF8 472 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 NKAIN3Q8N8D7 197 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 SLC22A11Q9NSA0 550 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 SLC5A6Q9Y289 635 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 GPR55Q9Y2T6 319 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZC3H12DA2A288 527 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZNF701M0R085 212 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 SLC16A6O15403 523 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CHATP28329 748 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 TFF2Q03403 129 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 PMPCAQ10713 525 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 Q7L0L9 218 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 DOK3Q7L591 496 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ANGPTL5Q86XS5 388 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 HAS2Q92819 552 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 GLTPQ9NZD2 209 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 A0A1W2PS29 197 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 C7orf72A4D263 438 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZNF195O14628 629 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 MTNR1BP49286 362 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZNF133P52736 654 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 RBMS2Q15434 407 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 CYP4V2Q6ZWL3 525 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 MZB1Q8WU39 189 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 RPL3LQ92901 407 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 RBMXL1Q96E39 390 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 SLC38A1Q9H2H9 487 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ZMAT3Q9HA38 289 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 LUZP4Q9P127 313 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CGGBP1Q9UFW8 167 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 OSGIN1Q9UJX0 560 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 FBXO4Q9UKT5 387 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 LAMA4Q16363 1823 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 RPL11P62913 178 aaKnown RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 RNF4P78317 190 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 DUSP8Q13202 625 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 OGFOD3Q6PK18 319 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ADGRE4PQ86SQ3 457 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CADM4Q8NFZ8 388 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
GPC6-201ENST00000377047 FAM3DQ96BQ1 224 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 ASB1Q9Y576 335 aa12.45□□□□□ -0.42
GPC6-201ENST00000377047 LOC100289279A0A1B0GTE1 492 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 C17orf112F2Z3M2 114 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 PHF1O43189 567 aaPredicted RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 PIAS2O75928 621 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 ZIC2O95409 532 aaPredicted RBP12.44□□□□□ -0.42
GPC6-201ENST00000377047 DLX5P56178 289 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 RAB5BP61020 215 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 RAB11AP62491 216 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 NHSL2Q5HYW2 709 aa12.44□□□□□ -0.42
GPC6-201ENST00000377047 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 178.1 ms