RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 WNT7AO00755 349 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CPMP14384 443 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 ADPRMQ3LIE5 342 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 AGBL4Q5VU57 503 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 GHSRQ92847 366 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 TMIGD2Q96BF3 282 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 MENTQ9BUN1 341 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 ATP13A2Q9NQ11 1180 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SLC2A9Q9NRM0 540 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 FAM166BA8MTA8 275 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 GLCEO94923 617 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 HTR1FP30939 366 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 PM20D1Q6GTS8 502 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 PSAPL1Q6NUJ1 521 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 C17orf107Q6ZR85 190 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 DPPA4Q7L190 304 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 COMMD1Q8N668 190 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 TCTEX1D1Q8N7M0 179 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SLC46A1Q96NT5 459 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SLC30A3Q99726 388 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 GPR12P47775 334 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 NHLH1Q02575 133 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 NHLH2Q02577 135 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 B3GNT9Q6UX72 402 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 GPR150Q8NGU9 434 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 IL17FQ96PD4 163 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 HELTA6NFD8 242 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 RD3LP0DJH9 198 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 USP53Q70EK8 1073 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 ZFP62Q8NB50 900 aaPredicted RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 OR52R1Q8NGF1 315 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 BET1LQ9NYM9 111 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 PTRH2Q9Y3E5 179 aaKnown RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 AQP7P3A6NL99 342 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 C1QBP02746 253 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 ALPLP05186 524 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SCCPDHQ8NBX0 429 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CMTM3Q96MX0 182 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 GPR55Q9Y2T6 319 aaPredicted RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 HMGN2P05204 90 aaKnown RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CST2P09228 141 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 NTSR1P30989 418 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SLC6A11P48066 632 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 MBOAT2Q6ZWT7 520 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SLC25A46Q96AG3 418 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 TIMM9Q9Y5J7 89 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 I6L893 689 aaPredicted RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CER1O95813 267 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CNN1P51911 297 aaKnown RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 KDM4DQ6B0I6 523 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 ISCA2Q86U28 154 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 ST8SIA2Q92186 375 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 A0A1W2PPQ1 181 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF595Q8IYB9 648 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 WDR83Q9BRX9 315 aaKnown RBP10.75□□□□□ -0.69
VPS13A-205ENST00000376636 NTMT1Q9BV86 223 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 CLMPQ9H6B4 373 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 NR0B2Q15466 257 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF787Q6DD87 383 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF845Q96IR2 970 aaPredicted RBP10.75□□□□□ -0.69
VPS13A-205ENST00000376636 YKT6O15498 198 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ALX3O95076 343 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 PAPLNO95428 1278 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 CHRM2P08172 466 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 DEFB132Q7Z7B7 95 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 SLC39A7Q92504 469 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 BCL2L2Q92843 193 aaPredicted RBP10.75□□□□□ -0.69
VPS13A-205ENST00000376636 SLC35A4Q96G79 324 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 GABARAPL1Q9H0R8 117 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 PXDNQ92626 1479 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 S100A4P26447 101 aaKnown RBP10.75□□□□□ -0.69
VPS13A-205ENST00000376636 DSC1Q08554 894 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 GJC3Q8NFK1 279 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 GATA6Q92908 595 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 PRAMEF26H0Y7S4 382 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 LDB3O75112 727 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ACRP10323 421 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 HYAL4Q2M3T9 481 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 LINC00299Q6ZSB3 139 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 SYT9Q86SS6 491 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 PNPLA1Q8N8W4 532 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 OR10P1Q8NGE3 313 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ACOD1A6NK06 481 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ST8SIA5O15466 376 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 CD1EP15812 388 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 CCR6P51684 374 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 MS4A2Q01362 244 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 OXA1LQ15070 435 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 DTWD2Q8NBA8 298 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 CLRN3Q8NCR9 226 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 YIF1AO95070 293 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 SLC35D3Q5M8T2 416 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ZNF468Q5VIY5 522 aaPredicted RBP10.75□□□□□ -0.69
VPS13A-205ENST00000376636 BCO1Q9HAY6 547 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 ATG2BQ96BY7 2078 aa10.75□□□□□ -0.69
VPS13A-205ENST00000376636 A0A0B4J203 849 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms