RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 SLC6A17Q9H1V8 727 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 OBP2AQ9NY56 170 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 RNF222A6NCQ9 220 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 TTLL8A6PVC2 850 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 PHYHO14832 338 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 DLSTP36957 453 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 SNTB1Q13884 538 aaKnown RBP19.12■□□□□ 0.65
UPF3A-202ENST00000375299 MANEAQ5SRI9 462 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 LIN54Q6MZP7 749 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 AMELYQ99218 206 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 PDCD10Q9BUL8 212 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 MMP25Q9NPA2 562 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 STARD5Q9NSY2 213 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 EPHA6Q9UF33 1036 aa19.12■□□□□ 0.65
UPF3A-202ENST00000375299 POM121BA6NF01 834 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 SMAD9O15198 467 aaKnown RBP19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ZNF735P0CB33 412 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 GPR18Q14330 331 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 PAN3Q58A45 887 aaKnown RBP19.11■□□□□ 0.65
UPF3A-202ENST00000375299 BEX5Q5H9J7 111 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 EMC4Q5J8M3 183 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ATG4DQ86TL0 474 aaPredicted RBP19.11■□□□□ 0.65
UPF3A-202ENST00000375299 PHOSPHO2Q8TCD6 241 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 LMF1Q96S06 567 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 SCPEP1Q9HB40 452 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ERVK-19Q9WJR5 959 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 NOP16Q9Y3C1 178 aaKnown RBP19.11■□□□□ 0.65
UPF3A-202ENST00000375299 H7C2Y5 167 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ALOX12BO75342 701 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 RENP00797 406 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ASAH2BP0C7U1 165 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 PNMTP11086 282 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 TAF13Q15543 124 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 LRRC37A5PQ49AS3 106 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 WBP2NLQ6ICG8 309 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ASPHD2Q6ICH7 369 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ACOT7LQ6ZUV0 252 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ZNF627Q7L945 461 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 ZNF440Q8IYI8 595 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 PM20D2Q8IYS1 436 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 BCORP1Q8N888 145 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 NKX3-1Q99801 234 aaPredicted RBP19.11■□□□□ 0.65
UPF3A-202ENST00000375299 EDEM2Q9BV94 578 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 SLC39A1Q9NY26 324 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 GDE1Q9NZC3 331 aa19.11■□□□□ 0.65
UPF3A-202ENST00000375299 TBC1D3DA0A087WVF3 549 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 TBC1D3LB9A6J9 549 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 DISC1C4P0D8 188 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 GPANK1O95872 356 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 TBC1D3HP0C7X1 549 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 MAOBP27338 520 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 RPL18Q07020 188 aaKnown RBP19.1■□□□□ 0.65
UPF3A-202ENST00000375299 EEF1A1P5Q5VTE0 462 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 TBC1D3CQ6IPX1 549 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 FDX2Q6P4F2 183 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 TBC1D3Q8IZP1 549 aaPredicted RBP19.1■□□□□ 0.65
UPF3A-202ENST00000375299 PLPP7Q8NBV4 271 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 OR1J4Q8NGS1 313 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 TSNAXQ99598 290 aaKnown RBP19.1■□□□□ 0.65
UPF3A-202ENST00000375299 LPAR4Q99677 370 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 FAM117AQ9C073 453 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 KCNG2Q9UJ96 466 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 RAB19A4D1S5 217 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 CCSO14618 274 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 CT45A8P0DMV1 189 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 CT45A9P0DMV2 189 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 UBE2IP63279 158 aaKnown RBP19.1■□□□□ 0.65
UPF3A-202ENST00000375299 STK11Q15831 433 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 CT45A2Q5DJT8 189 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 TSACCQ96A04 125 aaPredicted RBP19.1■□□□□ 0.65
UPF3A-202ENST00000375299 GMEB2Q9UKD1 530 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 PCDHB10Q9UN67 800 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 OR10H1Q9Y4A9 318 aa19.1■□□□□ 0.65
UPF3A-202ENST00000375299 A6NCN8 305 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 OR14I1A6ND48 311 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 ZNF98A6NK75 572 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 SLC25A12O75746 678 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 SRSF5Q13243 272 aaKnown RBP19.09■□□□□ 0.65
UPF3A-202ENST00000375299 HYAL4Q2M3T9 481 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 HFEQ30201 348 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 VWA2Q5GFL6 755 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 BPIFB2Q8N4F0 458 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 GATSQ8NAP1 163 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 OR1S2Q8NGQ3 325 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 OTOSQ8NHW6 89 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 HERVK_113Q902F9 699 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 SLC41A2Q96JW4 573 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 PTDSS2Q9BVG9 487 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 PLA2G2FQ9BZM2 168 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 SLCO5A1Q9H2Y9 848 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 GAREM1Q9H706 876 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 ELOVL3Q9HB03 270 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 TRANK1O15050 2925 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 FANCMQ8IYD8 2048 aa19.09■□□□□ 0.65
UPF3A-202ENST00000375299 TMEM200CA6NKL6 621 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 TGFBR3LH3BV60 316 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 GPR31O00270 319 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 CYB5AP00167 134 aa19.08■□□□□ 0.65
UPF3A-202ENST00000375299 HLA-AP01891 365 aaKnown RBP19.08■□□□□ 0.65
UPF3A-202ENST00000375299 CD74P04233 296 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms