RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 RDH10Q8IZV5 341 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 CEP19Q96LK0 163 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 OR2B2Q9GZK3 357 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 G6PC2Q9NQR9 355 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 POLE4Q9NR33 117 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 SPATA2Q9UM82 520 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 RASD1Q9Y272 281 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 R4GN57 208 aa11.21□□□□□ -0.61
PRPF4-202ENST00000374199 TVP23AA6NH52 213 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 APOA1P02647 267 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 MAPK3P27361 379 aaPredicted RBP11.21□□□□□ -0.62
PRPF4-202ENST00000374199 SLC35A1P78382 337 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 FOXO1Q12778 655 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 MELKQ14680 651 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 CSRP2Q16527 193 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 Q6ZSR3 168 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 GHDCQ8N2G8 530 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 DUSP18Q8NEJ0 188 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 DIRAS2Q96HU8 199 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 C5orf34Q96MH7 638 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 NOX4Q9NPH5 578 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 SACM1LQ9NTJ5 587 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 ADAM30Q9UKF2 790 aa11.21□□□□□ -0.62
PRPF4-202ENST00000374199 A0A1W2PQ09 198 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 PLGP00747 810 aaPredicted RBP11.2□□□□□ -0.62
PRPF4-202ENST00000374199 ADRA2CP18825 462 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 SRD5A2P31213 254 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 P2RY14Q15391 338 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 WDR38Q5JTN6 314 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 PRR23CQ6ZRP0 262 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 FAM220AQ7Z4H9 259 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 OR5AK2Q8NH90 309 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 SLC25A44Q96H78 314 aaPredicted RBP11.2□□□□□ -0.62
PRPF4-202ENST00000374199 ABHD6Q9BV23 337 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 PTPRBP23467 1997 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 PNPP00491 289 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 HIST1H3AP68431 136 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 HSD17B12Q53GQ0 312 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 HIST2H3PS2Q5TEC6 136 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 IL20RBQ6UXL0 311 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 HIST2H3AQ71DI3 136 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 GGNQ86UU5 652 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 TMEM123Q8N131 208 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 OR6N2Q8NGY6 317 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 ABCG5Q9H222 651 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 PNRC2Q9NPJ4 139 aaKnown RBP11.2□□□□□ -0.62
PRPF4-202ENST00000374199 C14orf119Q9NWQ9 140 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 FOXD3Q9UJU5 478 aaPredicted RBP11.2□□□□□ -0.62
PRPF4-202ENST00000374199 COA3Q9Y2R0 106 aaPredicted RBP11.2□□□□□ -0.62
PRPF4-202ENST00000374199 IFITM5A6NNB3 132 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 NPIPA5E9PKD4 350 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 OR6A2O95222 327 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 TCN2P20062 427 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 CTSSP25774 331 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 CD97P48960 835 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 SOX8P57073 446 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 DEFA1P59665 94 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 DEFA3P59666 94 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 RPS18P62269 152 aaKnown RBP11.2□□□□□ -0.62
PRPF4-202ENST00000374199 RAC1P63000 192 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 ZNF529Q6P280 563 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 FAM131AQ6UXB0 335 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 GLB1L2Q8IW92 636 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 ZNF248Q8NDW4 579 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 OR10S1Q8NGN2 331 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 EDEM2Q9BV94 578 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 NPIPA1Q9UND3 350 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 FLVCR1Q9Y5Y0 555 aa11.2□□□□□ -0.62
PRPF4-202ENST00000374199 TRABD2BA6NFA1 517 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 RGS5O15539 181 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 SSX4O60224 188 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 KHDRBS3O75525 346 aaKnown RBP11.19□□□□□ -0.62
PRPF4-202ENST00000374199 CALCBP10092 127 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 AHCYP23526 432 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 MMP16P51512 607 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 POU3F1Q03052 451 aaPredicted RBP11.19□□□□□ -0.62
PRPF4-202ENST00000374199 DTX1Q86Y01 620 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 BEST3Q8N1M1 668 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 OR4K17Q8NGC6 315 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 PLEKHA1Q9HB21 404 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 P4HTMQ9NXG6 502 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 COMMD3Q9UBI1 195 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 LRP12Q9Y561 859 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 R4GMQ9 66 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 FREM2Q5SZK8 3169 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 PHF3Q92576 2039 aaKnown RBP11.19□□□□□ -0.62
PRPF4-202ENST00000374199 LOC390937A0A1W2PQ73 354 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 PDCD5O14737 125 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 GFRA1P56159 465 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 MEP1BQ16820 701 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 STAC2Q6ZMT1 411 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 MDGA2Q7Z553 956 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 YIPF7Q8N8F6 280 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 POC5Q8NA72 575 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 OR1J4Q8NGS1 313 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 KCNE4Q8WWG9 221 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
PRPF4-202ENST00000374199 TTTY10Q9BZA0 68 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms