RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 DUX4Q9UBX2 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 PCDHB10Q9UN67 800 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 WNT11O96014 354 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 AK1P00568 194 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 CSTAP01040 98 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 NFYBP25208 207 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 IGFALSP35858 605 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 GPR143P51810 404 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 ADPRHP54922 357 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 SEC13P55735 322 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 FIGLAQ6QHK4 219 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 PUSL1Q8N0Z8 303 aaKnown RBP12.41□□□□□ -0.42
USP49-201ENST00000373006 RCBTB1Q8NDN9 531 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 ZNF417Q8TAU3 575 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 GPR148Q8TDV2 347 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 SFT2D1Q8WV19 159 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 MIOXQ9UGB7 285 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 NOP16Q9Y3C1 178 aaKnown RBP12.41□□□□□ -0.42
USP49-201ENST00000373006 URADA6NGE7 173 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 DOK2O60496 412 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ABHD16AO95870 558 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ZNF28P17035 718 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 CCR4P51679 360 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 PSMD4P55036 377 aaKnown RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 PRRT3Q5FWE3 981 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ZNF704Q6ZNC4 412 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 FAM3CQ92520 227 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 TOX2Q96NM4 488 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 GSN-AS1Q9NRJ2 163 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 COA4Q9NYJ1 87 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 MPDZO75970 2070 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 A0A0D9SG52 128 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 METTL21EPA6NDL7 271 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 PMS2P2O95744 297 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ITGB2P05107 769 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 BDKRB2P30411 391 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 CAPZA1P52907 286 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ATP1B3P54709 279 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 BLOC1S1P78537 153 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 DHRS2Q13268 280 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 SMAD2Q15796 467 aaKnown RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 GLT8D1Q68CQ7 371 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 SLC35D2Q76EJ3 337 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 RAB11FIP2Q7L804 512 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 CD163Q86VB7 1156 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 TCEAL3Q969E4 200 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ELF4Q99607 663 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 APOOQ9BUR5 198 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 SLC17A9Q9BYT1 436 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 GPN3Q9UHW5 284 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 SLC22A13Q9Y226 551 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 SPACA6W5XKT8 324 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 PRR19A6NJB7 356 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 SULT1C2O00338 296 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ACAA1P09110 424 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 GRK6P43250 576 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 PRMT2P55345 433 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 MANEAQ5SRI9 462 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 OR10K2Q6IF99 312 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 ZNF550Q7Z398 422 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 LDLRAD3Q86YD5 345 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 OR4S1Q8NGB4 309 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 SPPL3Q8TCT6 385 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 CCDC107Q8WV48 283 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 PPP1R1CQ8WVI7 109 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 RERGQ96A58 199 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 CTHRC1Q96CG8 243 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 TREM1Q9NP99 234 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 COMMD9Q9P000 198 aa12.4□□□□□ -0.42
USP49-201ENST00000373006 DHCR7Q9UBM7 475 aaKnown RBP12.4□□□□□ -0.42
USP49-201ENST00000373006 F5H0A9 414 aaPredicted RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 H0Y8X5 98 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 HLA-AP01891 365 aaKnown RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 CRYBA1P05813 215 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 ZNF10P21506 573 aaPredicted RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 AGTR1P30556 359 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 DLSTP36957 453 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 PBX2P40425 430 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 PPIAP62937 165 aaKnown RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 ENPP2Q13822 863 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 ZNHIT3Q15649 155 aaPredicted RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 C2orf27AQ580R0 203 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 ALG10Q5BKT4 473 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 ATPAF1Q5TC12 328 aaPredicted RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 CYB5R2Q6BCY4 276 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 RAB12Q6IQ22 244 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 C11orf87Q6NUJ2 197 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 RHOUQ7L0Q8 258 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 SLC43A2Q8N370 569 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 KCNRGQ8N5I3 272 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 CAMKVQ8NCB2 501 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 OR5T2Q8NGG2 359 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 TSACCQ96A04 125 aaPredicted RBP12.39□□□□□ -0.43
USP49-201ENST00000373006 SEH1LQ96EE3 360 aa12.39□□□□□ -0.43
USP49-201ENST00000373006 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms