RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 IFNW1P05000 195 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 COL8A2P25067 703 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CDAP32320 146 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ALDH3B1P43353 468 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 GSK3BP49841 420 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 UCP2P55851 309 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FMODQ06828 376 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 MAD2L1BPQ15013 274 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 TRAM2Q15035 370 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 HSP90B2PQ58FF3 399 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FAM27BQ5VT28 67 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 FOXL2NBQ6ZUU3 175 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 NRMQ8IXM6 262 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 LRRC18Q8N456 261 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 GEMIN6Q8WXD5 167 aaKnown RBP11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ACOT11Q8WXI4 607 aaPredicted RBP11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 ALG12Q9BV10 488 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 BEX2Q9BXY8 128 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RACGAP1Q9H0H5 632 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 RNF121Q9H920 327 aa11.71□□□□□ -0.53
TNFRSF1A-202ENST00000366159 CDC42EP2O14613 210 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NCR1O76036 304 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CLPTM1O96005 669 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FAM157BP0CG42 384 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF26P17031 533 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TCN1P20061 433 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CHN2P52757 468 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CTXN1P60606 82 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ERVS71-1P61550 626 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MRPS11P82912 194 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TRIP10Q15642 601 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 IFI44LQ53G44 452 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PABPC1L2AQ5JQF8 200 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FAM120AOSQ5T036 256 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 THEM4Q5T1C6 240 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RGS7BPQ6MZT1 257 aaPredicted RBP11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TBPL2Q6SJ96 375 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TMPRSS11FQ6ZWK6 438 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MBOAT2Q6ZWT7 520 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 MEX3DQ86XN8 651 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CLDN22Q8N7P3 220 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RBM15BQ8NDT2 890 aaKnown RBP11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OR1J2Q8NGS2 313 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 HSH2DQ96JZ2 352 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 POM121L2Q96KW2 1035 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TSPAN32Q96QS1 320 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FNDC11Q9BVV2 318 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SHARPINQ9H0F6 387 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 KCNS2Q9ULS6 477 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ANK2Q01484 3957 aa11.7□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LOC100509620A0A075B734 347 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TRAV27A0A087WT01 109 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ICMTO60725 284 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RP2O75695 350 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF682O95780 498 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SERPINA1P01009 418 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TGFAP01135 160 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NAT2P11245 290 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ZNF32P17041 273 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 APEX1P27695 318 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 IFNA8P32881 189 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 LSP1P33241 339 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RAD52P43351 418 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SLC9A3P48764 834 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PSG4Q00888 419 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PLP2Q04941 152 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TBC1D28Q2M2D7 210 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FAM205BPQ63HN1 556 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OAFQ86UD1 273 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 IGFN1Q86VF2 1251 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 OR51A7Q8NH64 312 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 FNDC8Q8TC99 324 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 RDH5Q92781 318 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 YIPF5Q969M3 257 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ANKRD19PQ9H560 264 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CHODLQ9H9P2 273 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CDH20Q9HBT6 801 aa11.69□□□□□ -0.54
TNFRSF1A-202ENST00000366159 IQCMA0A1B0GVH7 501 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 GMNCA6NCL1 334 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 C17orf100A8MU93 164 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 EFCAB9A8MZ26 197 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NDUFAB1O14561 156 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 PTP4A3O75365 173 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 IGHV3-13P01766 116 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SCG5P05408 212 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CST2P09228 141 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 SAGP10523 405 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NR2C1P13056 603 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 ACHEP22303 614 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 STOMP27105 288 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 WNT5AP41221 380 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 NUDT2P50583 147 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CDH15P55291 814 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 CD47Q08722 323 aa11.68□□□□□ -0.54
TNFRSF1A-202ENST00000366159 TMEM255AQ5JRV8 349 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms