RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 A0A0G2JNG1 304 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 KIR2DS3K7RE56 304 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 ZNF354AO60765 605 aaPredicted RBP16.03■□□□□ 0.16
SPAST-202ENST00000345662 THBS1P07996 1170 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 DIO1P49895 249 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 KIR2DS5Q14953 304 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 AADACL3Q5VUY0 350 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 LINC00346Q8IVM7 164 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 PIGCQ92535 297 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 CLSTN3Q9BQT9 956 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 NUDT22Q9BRQ3 303 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 KITLGP21583 273 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 P2RX1P51575 399 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 C12orf73Q69YU5 71 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 TMEFF1Q8IYR6 380 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 FAM71CQ8NEG0 241 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 CASD1Q96PB1 797 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 BCL2L10Q9HD36 194 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 RFPL4AA6NLU0 287 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 ANKRD30BLA7E2S9 258 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 RFPL4AL1F8VTS6 287 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 TRAPPC2LH3BP13 241 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 CHRM4P08173 479 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 HOXA9P31269 272 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 FCGR2CP31995 323 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 TRHRP34981 398 aaPredicted RBP16.03■□□□□ 0.16
SPAST-202ENST00000345662 NPSR1Q6W5P4 371 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 NAXDQ8IW45 347 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 TOLLIPQ9H0E2 274 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 ZCCHC4Q9H5U6 513 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 RNF212BA8MTL3 300 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 PYCR3Q53H96 274 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 CLEC9AQ6UXN8 241 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 MMP21Q8N119 569 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 SFXN1Q9H9B4 322 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 NECAP2Q9NVZ3 263 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 RARRES3Q9UL19 164 aa16.03■□□□□ 0.16
SPAST-202ENST00000345662 PRSS38A1L453 326 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 HIST1H1CP16403 213 aaKnown RBP16.02■□□□□ 0.16
SPAST-202ENST00000345662 GNB3P16520 340 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 CTBSQ01459 385 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 SSX1Q16384 188 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 SMUG1Q53HV7 270 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 OR4C16Q8NGL9 310 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 MITD1Q8WV92 249 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 PSMF1Q92530 271 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 DLL4Q9NR61 685 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 CUTCQ9NTM9 273 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 CDC14CA4D256 554 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 LEUTXA8MZ59 168 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 CD37P11049 281 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 CSF2RBP32927 897 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 EPHA4P54764 986 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 DUSP5Q16690 384 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 RNLSQ5VYX0 342 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 OR6K3Q8NGY3 331 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 C22orf15Q8WYQ4 148 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 OR1E3Q8WZA6 343 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 STACQ99469 402 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 PLAC1Q9HBJ0 212 aa16.02■□□□□ 0.16
SPAST-202ENST00000345662 GALR3O60755 368 aaPredicted RBP16.02■□□□□ 0.15
SPAST-202ENST00000345662 AADACP22760 399 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 NANOS1Q8WY41 292 aaKnown RBP16.02■□□□□ 0.15
SPAST-202ENST00000345662 TAS2R4Q9NYW5 299 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 AK3Q9UIJ7 227 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 CYBAP13498 195 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 NQO2P16083 231 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 RPL12P30050 165 aaKnown RBP16.02■□□□□ 0.15
SPAST-202ENST00000345662 ST3GAL2Q16842 350 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 FCRL6Q6DN72 434 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 SUMF1Q8NBK3 374 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 DUSP22Q9NRW4 184 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 CYB5R1Q9UHQ9 305 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 NTNG1Q9Y2I2 539 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 TJP1Q07157 1748 aa16.02■□□□□ 0.15
SPAST-202ENST00000345662 H7BYZ3 331 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 SEMA4FO95754 770 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 TSPAN12O95859 305 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ALOX5APP20292 161 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 BCL6P41182 706 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ECH1Q13011 328 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ERV3-1Q14264 604 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 FAM27D1Q5T7N8 215 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 STAC2Q6ZMT1 411 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 LYG2Q86SG7 212 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 OR5M1Q8NGP8 315 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ELF4Q99607 663 aaPredicted RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 C12orf10Q9HB07 376 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 RHOFQ9HBH0 211 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 FTSJ1Q9UET6 329 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 HLA-DOBP13765 273 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 HLXQ14774 488 aaPredicted RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 RPUSD3Q6P087 351 aaKnown RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 CPEB2Q7Z5Q1 589 aaKnown RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 SLC6A18Q96N87 628 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 SLC6A13Q9NSD5 602 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 HCFC1R1Q9NWW0 138 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 ARID1BQ8NFD5 2236 aaPredicted RBP16.01■□□□□ 0.15
SPAST-202ENST00000345662 ACTL6BO94805 426 aa16.01■□□□□ 0.15
SPAST-202ENST00000345662 SCAF4O95104 1147 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms