RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MS4A18H0YCH9 400 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 M0QZK8 103 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 AQP9O43315 295 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 GGCTO75223 188 aaKnown RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 MS4A18Q3C1V0 323 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 OR2T2Q6IF00 324 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 ILDR1Q86SU0 546 aaPredicted RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 TSACCQ96A04 125 aaPredicted RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 TMEM230Q96A57 120 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 BCO1Q9HAY6 547 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 NXPH3O95157 252 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 BMP5P22003 454 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 GABRB3P28472 473 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 DCAF12Q5T6F0 453 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 NXNL2Q5VZ03 156 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 OR5D13Q8NGL4 314 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 SEH1LQ96EE3 360 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 SLC35A4Q96G79 324 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 ASIC5Q9NY37 505 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 SLC6A11P48066 632 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 HLXQ14774 488 aaPredicted RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 LETMD1Q6P1Q0 360 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 TFAP2BQ92481 460 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 POLDIP2Q9Y2S7 368 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 APEHP13798 732 aaKnown RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 C21orf33P30042 268 aaPredicted RBP16.33■□□□□ 0.2
SMAD4-201ENST00000342988 AGBL4Q5VU57 503 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 HMGN2P46Q86SG4 172 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 BTNL2Q9UIR0 455 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 HSPB8Q9UJY1 196 aa16.33■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF785A8K8V0 405 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 RAB27BO00194 218 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 ST8SIA3O43173 380 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 IL17AQ16552 155 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 OR10C1Q96KK4 312 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 KLRC4-KLRK1H3BQV0 150 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SLC35G1Q2M3R5 365 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 ADGRG7Q96K78 797 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 NSG2Q9Y328 171 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 P2RX3P56373 397 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SLC39A7Q92504 469 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SIX6O95475 246 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 DOC2AQ14183 400 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SLC10A6Q3KNW5 377 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 FAM3CQ92520 227 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 RBM14Q96PK6 669 aaKnown RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 MYLKQ15746 1914 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 RRP8O43159 456 aaKnown RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 GTDC1Q4AE62 458 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 RANBP10Q6VN20 620 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 TMEM182Q6ZP80 229 aaPredicted RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 RETREG3Q86VR2 466 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 CMTM4Q8IZR5 234 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 LSMEM1Q8N8F7 131 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SLC35B2Q8TB61 432 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 PINX1Q96BK5 328 aaKnown RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 MAP1LC3CQ9BXW4 147 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 OR2B8PP59922 312 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 RGNQ15493 299 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 EXT1Q16394 746 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 CD99L2Q8TCZ2 262 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 UTP4Q969X6 686 aaKnown RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SSR4P51571 173 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 C21orf58P58505 322 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 SLC25A11Q02978 314 aaKnown RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF141Q15928 474 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 NETO1Q8TDF5 533 aa16.32■□□□□ 0.2
SMAD4-201ENST00000342988 DCAF13Q9NV06 445 aaKnown RBP16.32■□□□□ 0.2
SMAD4-201ENST00000342988 TNS2Q63HR2 1409 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 CACNA1IQ9P0X4 2223 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 GIPP09681 153 aaPredicted RBP16.31■□□□□ 0.2
SMAD4-201ENST00000342988 CD1BP29016 333 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 PRR27Q6MZM9 219 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 GPR26Q8NDV2 337 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 SLC46A1Q96NT5 459 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 DIP2CQ9Y2E4 1556 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 NME2P1O60361 137 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 SEMA4FO95754 770 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 NUDT3O95989 172 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 DSC1Q08554 894 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 OR1L1Q8NH94 360 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 L3HYPDHQ96EM0 354 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 PIAS3Q9Y6X2 628 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 PHF3Q92576 2039 aaKnown RBP16.31■□□□□ 0.2
SMAD4-201ENST00000342988 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 BICRAQ9NZM4 1560 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 IL1RNP18510 177 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 RPL24P83731 157 aaKnown RBP16.31■□□□□ 0.2
SMAD4-201ENST00000342988 PRAMEF20Q5VT98 475 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 OR7E24Q6IFN5 339 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 ANKRD53Q8N9V6 530 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 OR2AK2Q8NG84 335 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 C2CD4CQ8TF44 421 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 DDX31Q9H8H2 851 aaKnown RBP16.31■□□□□ 0.2
SMAD4-201ENST00000342988 CBLCQ9ULV8 474 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 WNK2Q9Y3S1 2297 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 SLC5A10A0PJK1 596 aa16.31■□□□□ 0.2
SMAD4-201ENST00000342988 ZNF593O00488 134 aaPredicted RBP16.31■□□□□ 0.2
SMAD4-201ENST00000342988 CDC34P49427 236 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms