RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 NDUFAF7Q7L592 441 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 MCATQ8IVS2 390 aaKnown RBP8.58□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF101Q8IZC7 436 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 METTL27Q8N6F8 245 aaPredicted RBP8.58□□□□□ -1.04
TRERF1-201ENST00000340840 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 OR6K3Q8NGY3 331 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 CCL4L1Q8NHW4 92 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 RELTQ969Z4 430 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 C3orf49Q96BT1 292 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 SLC7A5P2Q9GIP4 190 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 C2orf42Q9NWW7 574 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 HPF1Q9NWY4 346 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 ICAM5Q9UMF0 924 aa8.58□□□□□ -1.04
TRERF1-201ENST00000340840 BLACEA4D250 179 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 B4DGG1 531 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 F8W036 122 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF254O75437 659 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 PGCP20142 388 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 POU3F2P20265 443 aaPredicted RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 CDKN2AP42771 156 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 BLOC1S1P78537 153 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 CYCSP99999 105 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 FZD5Q13467 585 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 AKIRIN2Q53H80 203 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 BOLLQ8N9W6 283 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 CLRN3Q8NCR9 226 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 RSC1A1Q92681 617 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 SCGB3A2Q96PL1 93 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 TIMP4Q99727 224 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 DNTTIP1Q9H147 329 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 EPHA6Q9UF33 1036 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 MRM2Q9UI43 246 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 BDP1A6H8Y1 2624 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 PLXND1Q9Y4D7 1925 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 KIR2DS5A0A0G2JLQ3 304 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 A0A0G2JNG1 304 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 TCRBV16S1A1N1A0A5B0 115 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 FAM221BA6H8Z2 402 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 KIR2DS3K7RE56 304 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 IMPA2O14732 288 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 PLRG1O43660 514 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 CTAG2O75638 210 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 AKR1C4P17516 323 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 TACR3P29371 465 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 RPS27P42677 84 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 BLKP51451 505 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 RPS11P62280 158 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 HYAL1Q12794 435 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 EIF2B1Q14232 305 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF273Q14593 569 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 KIR2DS5Q14953 304 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF141Q15928 474 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 TMEM255AQ5JRV8 349 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 GLYATL3Q5SZD4 288 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF704Q6ZNC4 412 aaPredicted RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 STOML3Q8TAV4 291 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 FBXW5Q969U6 566 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 MARC2Q969Z3 335 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 SLC6A7Q99884 636 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 NKX6-2Q9C056 277 aaPredicted RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 LMAN1LQ9HAT1 526 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 PIPOXQ9P0Z9 390 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 MYEF2Q9P2K5 600 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 A0A1B0GTQ1 180 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 SCGNO76038 276 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 S100A6P06703 90 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 TPT1P13693 172 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 PSG6Q00889 435 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 HHEXQ03014 270 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 RPL18Q07020 188 aaKnown RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 ADGRE4PQ86SQ3 457 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 DEFB119Q8N690 84 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 BCORP1Q8N888 145 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 STK35Q8TDR2 534 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 FOXRED1Q96CU9 486 aaPredicted RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 GPER1Q99527 375 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 MS4A7Q9GZW8 240 aaPredicted RBP8.57□□□□□ -1.04
TRERF1-201ENST00000340840 SLC17A5Q9NRA2 495 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 COPS7AQ9UBW8 275 aa8.57□□□□□ -1.04
TRERF1-201ENST00000340840 OR2M5A3KFT3 312 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 C17orf105B2RV13 164 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 TNFRSF10CO14798 259 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 H2BFMP0C1H6 154 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 GIMD1P0DJR0 217 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 VSIG10L2P0DP72 767 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF20P17024 532 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF28P17035 718 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 CRABP1P29762 137 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 GUCA1AP43080 201 aaPredicted RBP8.56□□□□□ -1.04
TRERF1-201ENST00000340840 OR3A2P47893 321 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 DHODHQ02127 395 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 GLO1Q04760 184 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 SPOCK1Q08629 439 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 SNTB1Q13884 538 aaKnown RBP8.56□□□□□ -1.04
TRERF1-201ENST00000340840 ERV3-1Q14264 604 aa8.56□□□□□ -1.04
TRERF1-201ENST00000340840 SMCO1Q147U7 214 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms