RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 J3QRE1 110 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 KALRNO60229 2985 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 UPK3AO75631 287 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 STSP08842 583 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 HTR1AP08908 422 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 OR2T7P0C7T2 308 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 TMIGD3P0DMS9 266 aaPredicted RBP12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 GAAP10253 952 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 CEACAM8P31997 349 aaPredicted RBP12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 MVKQ03426 396 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 NRN1LQ496H8 165 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 TSPO2Q5TGU0 170 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 FOXL2NBQ6ZUU3 175 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 SEM1Q6ZVN7 128 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 NUFIP2Q7Z417 695 aaKnown RBP12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 TIGD4Q8IY51 512 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 OR2T27Q8NH04 317 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 NSMAFQ92636 917 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 SFXN3Q9BWM7 321 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 CCDC90BQ9GZT6 254 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC7A10Q9NS82 523 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 ERVK-18Q9QC07 812 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 UPB1Q9UBR1 384 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 TINAGQ9UJW2 476 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 EXOSC1Q9Y3B2 195 aaKnown RBP12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 UGT2A1Q9Y4X1 527 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 TMEM14AQ9Y6G1 99 aa12.83□□□□□ -0.35
NIPAL3-202ENST00000339255 ESPL1Q14674 2120 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 IGKV1D-43A0A0B4J1Z2 117 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 A0A1W2PPL8 197 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 FAM171A2A8MVW0 826 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 E9PLN8 166 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 GLI4P10075 376 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 ZNF823P16415 610 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 NPR2P20594 1047 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 KIR2DL2P43627 348 aaPredicted RBP12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 CDH15P55291 814 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 SH3BGRP55822 239 aaPredicted RBP12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 MRPS34P82930 218 aaKnown RBP12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 ROR2Q01974 943 aaKnown RBP12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 ETFDHQ16134 617 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 KCNMB1Q16558 191 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 TEX30Q5JUR7 227 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 PHYHD1Q5SRE7 291 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 FBXW9Q5XUX1 488 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 B3GLCTQ6Y288 498 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 ERI1Q8IV48 349 aaKnown RBP12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 CNEP1R1Q8N9A8 125 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 ZNF511Q8NB15 262 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 OR10H5Q8NGA6 315 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 OR4F15Q8NGB8 312 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 NELFAQ9H3P2 528 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 GPR35Q9HC97 309 aa12.83□□□□□ -0.36
NIPAL3-202ENST00000339255 PHYHO14832 338 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 TMCC2O75069 709 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 TNFSF13O75888 250 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 APOL3O95236 402 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 CLPTM1O96005 669 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 MRPL3P09001 348 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SMIM18P0DKX4 95 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 MSR1P21757 451 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 NAA10P41227 235 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 ENTPD1P49961 510 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 LSM6P62312 80 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SIRPAP78324 504 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 ADAM8P78325 824 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 DBPQ10586 325 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 TBCEQ15813 527 aaPredicted RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 PCK2Q16822 640 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SHFQ7M4L6 423 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SLC35F2Q8IXU6 374 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SPARTQ8N0X7 666 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 UBE2J2Q8N2K1 259 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 OR10H4Q8NGA5 316 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SGCDQ92629 289 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 FCGR1BQ92637 280 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 RBM24Q9BX46 236 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 C12orf49Q9H741 205 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 WDR76Q9H967 626 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 SEC61A2Q9H9S3 476 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 MRPL22Q9NWU5 206 aaKnown RBP12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 ERGIC3Q9Y282 383 aa12.82□□□□□ -0.36
NIPAL3-202ENST00000339255 TMEM129A0AVI4 362 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 DAPL1A0PJW8 107 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 HSPB2A8KAH6 182 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 C12orf71A8MTZ7 269 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 SELENOFO60613 162 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 TOXO94900 526 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 IL18BPO95998 194 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 TFP02787 698 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 MT-ND2P03891 347 aa12.81□□□□□ -0.36
NIPAL3-202ENST00000339255 CD8BP10966 210 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms