RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 RENP00797 406 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 RAB40ALP0C0E4 278 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 NFYAP23511 347 aaPredicted RBP15□□□□□ -0.01
CDC42EP4-201ENST00000335793 PSMD4P55036 377 aaKnown RBP15□□□□□ -0.01
CDC42EP4-201ENST00000335793 RAG2P55895 527 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 ZNF528Q3MIS6 628 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 OR51A4Q8NGJ6 313 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 RAB40AQ8WXH6 277 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 VSTM2LQ96N03 204 aa15□□□□□ -0.01
CDC42EP4-201ENST00000335793 PYCARD-AS1I3L0S3 204 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 GSTZ1O43708 216 aaPredicted RBP14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 DPP4P27487 766 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 PBX2P40425 430 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 FHL1Q13642 323 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 SMCO1Q147U7 214 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 ZNF627Q7L945 461 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 PMM1Q92871 262 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 HGDQ93099 445 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 PBX4Q9BYU1 374 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 WDR76Q9H967 626 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 PCDHGA5Q9Y5G8 931 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 GUCA2AQ02747 115 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 SQSTM1Q13501 440 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 SLC35D3Q5M8T2 416 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 STPG1Q5TH74 334 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 OR1S1Q8NH92 325 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 THAP6Q8TBB0 222 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 NKD1Q969G9 470 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 GFI1Q99684 422 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 ZNF426Q9BUY5 554 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 KCNK15Q9H427 330 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 EXO5Q9H790 373 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 FRRS1LQ9P0K9 344 aa14.99□□□□□ -0.01
CDC42EP4-201ENST00000335793 CTNSO60931 367 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CT45A8P0DMV1 189 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CT45A9P0DMV2 189 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 DEFA6Q01524 100 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CT45A2Q5DJT8 189 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 SSX9Q7RTT3 188 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 GLB1L2Q8IW92 636 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 RGP1Q92546 391 aaPredicted RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 NRSN2Q9GZP1 204 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 ATG5Q9H1Y0 275 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 MRM2Q9UI43 246 aaKnown RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 COL6A3P12111 3177 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 C17orf105B2RV13 164 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 GOSR2O14653 212 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 ARPC3O15145 178 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 GATCO43716 136 aaKnown RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 RP2O75695 350 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 SLC25A12O75746 678 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CTHP32929 405 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 PLA2G7Q13093 441 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CMIPQ8IY22 773 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 DND1Q8IYX4 353 aaKnown RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 DEFB119Q8N690 84 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 OR5M1Q8NGP8 315 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 OR10K1Q8NGX5 313 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 HAVCR1Q96D42 359 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 OR1F2PQ96R84 312 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 TRAV8-7A0A075B6U6 113 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 LOC100509620A0A075B734 347 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 A0A1B0GUH1 482 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 TGFBR3LH3BV60 316 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CTDSPLO15194 276 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 GPR37O15354 613 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 TGM6O95932 706 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 SPARCP09486 303 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 IFNGR1P15260 489 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CXCR1P25024 350 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 MAP3K8P41279 467 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 SNTB1Q13884 538 aaKnown RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 CD226Q15762 336 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 WBP2NLQ6ICG8 309 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 GLDNQ6ZMI3 551 aaPredicted RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 SLC16A9Q7RTY1 509 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 PUSL1Q8N0Z8 303 aaKnown RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 TMEM185AQ8NFB2 350 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 GPR148Q8TDV2 347 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 PHYHIPQ92561 330 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 MEGF10Q96KG7 1140 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 TGIF2Q9GZN2 237 aa14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 ZMAT3Q9HA38 289 aaKnown RBP14.98□□□□□ -0.01
CDC42EP4-201ENST00000335793 OIP5O43482 229 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 SEMA4FO95754 770 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 S1PR1P21453 382 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 TACR3P29371 465 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 RPL18Q07020 188 aaKnown RBP14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 LDLRAD3Q86YD5 345 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 METTL21AQ8WXB1 218 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 MIB2Q96AX9 1013 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 CABIN1Q9Y6J0 2220 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 PQLC2LA1A4F0 135 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 A6NCN8 305 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 THEGLP0DJG4 465 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 ADRA2CP18825 462 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 HLXQ14774 488 aaPredicted RBP14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 C9orf50Q5SZB4 431 aa14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 C19orf47Q8N9M1 422 aaKnown RBP14.97□□□□□ -0.01
CDC42EP4-201ENST00000335793 KTI12Q96EK9 354 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms