RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 IGKV1D-43A0A0B4J1Z2 117 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 GADD45GO95257 159 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 FABP3P05413 133 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 CSF3P09919 207 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 CDAP32320 146 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 GUCA1AP43080 201 aaPredicted RBP23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 OMPP47874 163 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 LIMS1P48059 325 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 PPOXP50336 477 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 RPS23P62266 143 aaKnown RBP23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 SPIBQ01892 262 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 PLP2Q04941 152 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 SEC23BQ15437 767 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 ZNF525Q8N782 197 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 SLC30A7Q8NEW0 376 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 VRK1Q99986 396 aaPredicted RBP23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 SLC7A8Q9UHI5 535 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 ARFGEF3Q5TH69 2177 aa23.85■■□□□ 1.41
ATPAF1-201ENST00000329231 XKRYO14609 159 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 PTP4A3O75365 173 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 NDUFB2O95178 105 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 GLRXP35754 106 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 TRIM25Q14258 630 aaKnown RBP23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 SGCAQ16586 387 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 MTX3Q5HYI7 312 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 SVOPLQ8N434 492 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 CLDN22Q8N7P3 220 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 FAM168AQ92567 244 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 SORCS2Q96PQ0 1159 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 DOK1Q99704 481 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 FUZQ9BT04 418 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 CCNB1IP1Q9NPC3 277 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 IL1RAPQ9NPH3 570 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 SIGLEC7Q9Y286 467 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 ADAM18Q9Y3Q7 739 aa23.84■■□□□ 1.41
ATPAF1-201ENST00000329231 ZFHX3Q15911 3703 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 IGHV4-30-2A0A087WSY4 118 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 IQCMA0A1B0GVH7 501 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 SH3PXD2BA1X283 911 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 ZNF26P17031 533 aaPredicted RBP23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 ATP6V1B2P21281 511 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 DNAL1Q4LDG9 190 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 CYP2R1Q6VVX0 501 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 MAPK1IP1LQ8NDC0 245 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 OR1J2Q8NGS2 313 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 MRPL24Q96A35 216 aaKnown RBP23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 NABP1Q96AH0 204 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 RSRC1Q96IZ7 334 aaKnown RBP23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 THTPAQ9BU02 230 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 RAB1BQ9H0U4 201 aa23.83■■□□□ 1.41
ATPAF1-201ENST00000329231 TMEM129A0AVI4 362 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 SLC22A23A1A5C7 686 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 GYG2O15488 501 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 AHCYL1O43865 530 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 GPRIN2O60269 458 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 ERCC1P07992 297 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 MMP7P09237 267 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 EVX1P49640 407 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 HSF2Q03933 536 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 TBC1D28Q2M2D7 210 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 FAM27BQ5VT28 67 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 LCN8Q6JVE9 175 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 DHFR2Q86XF0 187 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 SLC7A6OSQ96CW6 309 aaPredicted RBP23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 Q96M85 177 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 ZNF570Q96NI8 536 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 LRMDAQ9H2I8 198 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 CDH20Q9HBT6 801 aa23.82■■□□□ 1.4
ATPAF1-201ENST00000329231 UNC119BA6NIH7 251 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 SLC25A16P16260 332 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 GPR139Q6DWJ6 353 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 FAM122BQ7Z309 247 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 ZDHHC21Q8IVQ6 265 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 ASB9Q96DX5 294 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 CLPTM1LQ96KA5 538 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 GPX7Q96SL4 187 aaPredicted RBP23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 DYNLRB1Q9NP97 96 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 CSPG4Q6UVK1 2322 aa23.81■■□□□ 1.4
ATPAF1-201ENST00000329231 H7C1C5 153 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 LY6HO94772 140 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 SNAP29O95721 258 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 LCN6P62502 163 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 MS4A2Q01362 244 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 BNIP1Q12981 228 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 MESTQ5EB52 335 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 PABPC1L2AQ5JQF8 200 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 FOXL2NBQ6ZUU3 175 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 C10orf105Q8TEF2 133 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 BTBD10Q9BSF8 475 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 MYOZ1Q9NP98 299 aaPredicted RBP23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 NRIP3Q9NQ35 241 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 TMCC3Q9ULS5 477 aa23.8■■□□□ 1.4
ATPAF1-201ENST00000329231 A0A1W2PPL8 197 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 PRSS37A4D1T9 235 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 CCL2P13500 99 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 ZNF32P17041 273 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 HOXB4P17483 251 aaPredicted RBP23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 SDHAP31040 664 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 RRM2P31350 389 aa23.79■■□□□ 1.4
ATPAF1-201ENST00000329231 APLNRP35414 380 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms