RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MYF5P13349 255 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 RAG2P55895 527 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MRPS10P82664 201 aaKnown RBP11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MANEAQ5SRI9 462 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 DCAF12L2Q5VW00 463 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 GLT8D1Q68CQ7 371 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MAMDC2Q7Z304 686 aaPredicted RBP11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 KCTD20Q7Z5Y7 419 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 PMM1Q92871 262 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 LINC00052Q96N35 136 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 NUDT22Q9BRQ3 303 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 SEC61A2Q9H9S3 476 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 ICAM5Q9UMF0 924 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 MOKQ9UQ07 419 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 TRANK1O15050 2925 aa11.67□□□□□ -0.54
HMGCS1-201ENST00000325110 IGHV5-51A0A0C4DH38 117 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 hCG_1807616A0A1W2PRN6 198 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 PLATP00750 562 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 CSF1P09603 554 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 UBE2IP63279 158 aaKnown RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 RASGEF1BQ0VAM2 473 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 FZD2Q14332 565 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 GGTLC2Q14390 218 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 KCTD18Q6PI47 426 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 GSG1LQ6UXU4 331 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 ZBTB44Q8NCP5 570 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 OR2AK2Q8NG84 335 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 GPBAR1Q8TDU6 330 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 C15orf40Q8WUR7 153 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 ANKRD10Q9NXR5 420 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 B9D1Q9UPM9 204 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 HIF3AQ9Y2N7 669 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 FANCMQ8IYD8 2048 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 C13orf42A0A1B0GVH6 325 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 PCP4L1A6NKN8 68 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 SRPX2O60687 465 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF117Q03924 483 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 TMPRSS9Q7Z410 1059 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 ATG4DQ86TL0 474 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 OR4S1Q8NGB4 309 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 DCBLD2Q96PD2 775 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 LRRC61Q9BV99 259 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 POTEKPQ9BYX7 375 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 TINAGL1Q9GZM7 467 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 POFUT1Q9H488 388 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 COA3Q9Y2R0 106 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 SPTY2D1-AS1A0A0U1RR47 76 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 MCRIP1C9JLW8 97 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 CTDSPLO15194 276 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 SULT1B1O43704 296 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 CTAG2O75638 210 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 RRASP10301 218 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 ALOX5APP20292 161 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 CMIPQ8IY22 773 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 SPACA5Q96QH8 159 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 SLC6A7Q99884 636 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 TRAF4Q9BUZ4 470 aaPredicted RBP11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 FBRSQ9HAH7 460 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 PLCL2Q9UPR0 1127 aa11.66□□□□□ -0.54
HMGCS1-201ENST00000325110 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 EEF1E1-BLOC1S5C9J1V9 151 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 XRCC3O43542 346 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 SUSD5O60279 629 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 NSA2O95478 260 aaKnown RBP11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 DRD1P21728 446 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 SERTAD2Q14140 314 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF626Q68DY1 528 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM65Q6PI78 240 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 UNQ9370/PRO34162Q6UXP9 181 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 OR10H5Q8NGA6 315 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 OR51A2Q8NGJ7 313 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 LCORQ96JN0 433 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 C4orf45Q96LM5 186 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF587Q96SQ5 575 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ETV7Q9Y603 341 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 SDK2Q58EX2 2172 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 TMEM82A0PJX8 343 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 PRKXP51817 358 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 H2BFSP57053 126 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 EGR4Q05215 589 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 FMODQ06828 376 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 GK2Q14410 553 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 HLXQ14774 488 aaPredicted RBP11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 CFAP77Q6ZQR2 320 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 SLC29A4Q7RTT9 530 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF546Q86UE3 836 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 PDZD9Q8IXQ8 264 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF101Q8IZC7 436 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 BPIFB2Q8N4F0 458 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 FAM71CQ8NEG0 241 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 TAS2R8Q9NYW2 309 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 NPIPA5E9PKD4 350 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 H7C417 338 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 IFNA6P05013 189 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 CTLA4P16410 223 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 AKR1C4P17516 323 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 PGCP20142 388 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms